Epinephelus lanceolatus (giant grouper): 117270739
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Entry
117270739 CDS
T07331
Symbol
hbs1l
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117270739 (hbs1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ely03019
]
117270739 (hbs1l)
Messenger RNA biogenesis [BR:
ely03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
117270739 (hbs1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
117270739
NCBI-ProteinID:
XP_033504432
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Position
18:13447163..13486687
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AA seq
700 aa
AA seq
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MSRHRNVRGYNYDEDFDDDDVYGHSVDDDYCCISPATANQFIYSRQERQAPREEPLEEEE
YEDDVPMSPTVSHDLDPLDQAKLYSCLDHMRTVLGDAVPDSVLTQAAIRCGFDPQKALDA
VLSEDAKTAPVTRSTNEEMAPVARVGQEKEPLPQRIRPEAGKAKIRDVPQNKLDSEVVPK
VARMTVSGKKQTMGFDVPSAGENGVVTPSARRGASPENATAPPASESTPKRPETPSKGSN
GDEPPTAPTPGRSSGKARQSINIKAELEKRQGGKTLLNLVVIGHVDAGKSTLMGHLLYLL
GNVNKRTMHKYEQESKKAGKASFAYAWVLDETGEERDRGVTMDVGMTKFETNSKVVTLMD
APGHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFEAGGQTREHALLVRSLGVTQLAVA
VNKMDQVNWQQVRFKEIVSKLGQFLKQAGFKESDVFYIPSSGLSGENLTTRSSVSELTSW
YSGPSLLEQIDALKAPQRSVDKPFRLCVSDVFKDQGSGFCVTGKIEAGYIQTGDRILAMP
PNETCTVKGITLHDEALDWAAAGDHVSLTVTGMDIIKINVGCVFCDPKEPIRVCTRFRAR
ILLFNIEVPVTQGFPVLLHYQTVSEPATIRKLISVLHKSSGEVLKKKPKCLSKGMNAIVE
IQTQRPVSLELYKDYKELGRFMLRYVGSTIAAGVVTEIKE
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggcacagaaatgttcgaggttacaactacgatgaagactttgacgacgatgac
gtgtatggacactctgtggatgatgactactgctgcatatcaccagcaacagcgaatcag
ttcatctactcacgtcaagagaggcaagcaccaagggaagagcctttagaagaggaagaa
tatgaagatgatgttcccatgtccccgaccgtcagccacgacctcgaccctcttgatcaa
gccaagctgtattcctgtctggaccatatgcgcactgtgctcggagatgcagtgccagat
tcagtcctgacccaggcagccataagatgcggattcgacccacagaaggccctggatgca
gtcctgtctgaagacgctaagacggccccagttaccagaagcaccaatgaagagatggct
ccggtagcaagagtgggtcaggagaaagagccgcttccacaaagaataagaccagaggca
gggaaagctaaaatcagagatgtgcctcagaataaactggactctgaagtggtacccaaa
gtggcccgcatgaccgtctctggcaagaagcagaccatgggctttgacgttcccagcgca
ggggagaatggcgtcgtcaccccttctgcacgccgaggcgccagccctgaaaacgccact
gctccccctgcttcagagtccacgcccaagcgtcccgagactccatcgaaagggtcaaat
ggagacgagccccccacagctcccaccccaggccgctcctccggaaaggctcggcagtcg
atcaatatcaaggctgaactggagaagaggcagggtggcaaaactctgctaaatctggtg
gttataggtcacgtggatgcaggtaaaagcacgctgatgggccacctgctgtatctgctg
ggcaacgtcaacaagcgcaccatgcacaagtatgagcaggaatcaaagaaggcgggaaag
gcctccttcgcctatgcatgggtcctggatgaaactggggaggagagggacagaggcgtg
accatggatgtgggcatgaccaagtttgagaccaactcgaaggtggtgactctgatggac
gcgccgggacacaaagacttcatccccaacatgatcacaggagctgcacaggccgacgtg
gcggtgctcgtggtggatgccagccgaggagagttcgaggcaggcttcgaggcgggaggt
cagaccagagagcatgccttgttggtgcgctcgcttggcgtcactcagctggctgtggct
gtcaacaagatggaccaggtaaactggcaacaagtgcgtttcaaagagattgtttccaaa
cttggccagtttctcaagcaggcaggattcaaggagtctgatgttttctacatccccagc
agcggcttgtcaggagagaacctcacaaccaggagctctgtgtcagaactcacctcttgg
tactccggtcccagcctgctggagcagattgatgccctcaaagccccacagagatctgta
gacaaaccgttcagactctgcgtttccgatgtgttcaaagaccagggttcaggcttctgt
gttacagggaagatcgaggctggttacattcagactggagacagaatactggcgatgcct
cccaatgaaacctgcactgtcaaaggtataactctacatgacgaggctctggactgggct
gctgcaggagaccacgtcagcctcacagtcacaggcatggacatcatcaagatcaacgtg
ggctgtgtgttctgcgatcccaaggagcctattcgagtgtgtactcgattcagagccaga
atccttctctttaatatcgaagtcccagtcacacaaggtttcccagtattgctgcattac
caaaccgtcagcgagccggccaccattagaaaactaattagtgttctacacaagagcagc
ggtgaggtcctcaagaagaaaccaaagtgtttgagtaaaggcatgaacgccatcgtggag
atccagactcagaggccggtgtcattagagttatacaaggactacaaggagctgggacgc
ttcatgctcagatatgttggctcaaccatcgctgcaggggttgtcactgagatcaaagaa
tga
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