Epinephelus lanceolatus (giant grouper): 117270774
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Entry
117270774 CDS
T07331
Symbol
capn3b
Name
(RefSeq) calpain-3b isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117270774 (capn3b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ely01002
]
117270774 (capn3b)
Enzymes [BR:
ely01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
117270774 (capn3b)
Peptidases and inhibitors [BR:
ely01002
]
Cysteine peptidases
Family C2: calpain family
117270774 (capn3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
Calpain_u2
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
EF-hand_5
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
117270774
NCBI-ProteinID:
XP_033504519
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All DBs
Position
18:20962605..20987206
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AA seq
769 aa
AA seq
DB search
MGEKKYKKAVVEEMKVKVLFEKEASYEPDDKADYPPAGMNSIYSAILSRNEAVKDAKRLK
TFLELRDKYVKKGVVFEDPLFPANDSSLFYSHKPPIKFEWKRPSEISENPHFIIDGANRT
DICQGELGDCWLLAAIACLTLNEKLLYRVIPKDQSFTENYAGIFHFQFWRYGEWIDVVVD
DRIPTWNNKLVFTKSFRKNEYWSALLEKAYAKLHGSYEALKGGNTLDAMEDFTGGVTEFF
ELSEAPKDLYSIMRKALERGSLMGCSIDVFSSAELESRTDLGLVRGHAYSIIGLAECDEV
VKDAKVRLIRLRNPWGRVLWKGPWCPNSKEWSTISIADRENLKKQTVEESEFWMSFDDFK
RNFTKLEMCNLTPDTLQGDERNSWSVSINEGRWVRGSSAGGCRNFPETFWTNPQYRMQLF
EEDDDAEDGEALCTVVVALMQKGRRMQRHQGARFLTIGFSIYEVPKEMCGKDQHLQKDFF
LYTASKVKCKTYINLREVTERFHLPPGEYVIIPTTFEPHQEGEFILRVFSEKRSTSEETE
NSIGSNQIQQDKKKKDKPIVFVSDRARANKEIEHDGIEGERKKKPKRKLLESEEETEEEK
QFRAIYRQIAGEDMQVCANELKMIMRNVLSKHNDIKTEGFSLETCRSMIALMDTDGTGKL
NLQEFKHLWKKIKEWQLIFKRYDKDKSGSISSFEMRNAVKNAGFNLNRQLYDIIAMRYAD
EQLNIDFDSYICCFVRLEGMFRAFNAFDKDGDGVIKLNVLEWLQLTLYS
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgggggagaagaagtataaaaaggctgttgttgaagagatgaaggtgaaggtgctcttt
gaaaaagaagcatcatacgagccagatgacaaagctgattaccctcctgctgggatgaac
tccatctactctgctattctgagcaggaacgaggctgtcaaggatgccaagcgccttaag
acttttctggagctgcgggacaaatacgtgaagaagggtgtggtgtttgaagaccccctg
tttcctgctaatgactcctcactcttctacagccataaaccccccattaagtttgagtgg
aaacgtccctcggaaatttctgaaaacccccacttcatcatagatggagccaacaggacc
gacatctgtcaaggagaattgggtgactgctggctgctggccgccatcgcctgtctgacg
ttgaacgagaagcttctgtacagagtgattcctaaggaccagagcttcactgaaaactac
gccggcatcttccacttccagttctggcgttatggcgagtggatcgatgtggtcgtggac
gaccgcatccccacctggaacaacaagctggttttcaccaaatctttcagaaagaacgag
tactggagtgctcttttggaaaaagcttatgccaagttgcacgggtcctatgaggcactc
aaaggaggtaacactttggatgccatggaggatttcacagggggagttacagagttcttt
gagttgtccgaggcgcccaaagacctctacagcatcatgaggaaggcgctggagagaggc
tcactgatgggctgctccatagatgttttttcatctgctgaattggagagtcggactgat
cttgggctggtcaggggtcatgcctactccatcataggcctggcggagtgtgacgaggtc
gtaaaagacgccaaagttcgcctgattcgcctgcgcaatccctggggtcgtgtactgtgg
aaaggaccatggtgtccaaattcaaaggaatggtcgaccatttccatcgcagacagggaa
aacttaaagaaacagaccgtagaggagagtgagttctggatgtcttttgatgatttcaag
aggaacttcacaaaactggagatgtgtaacttgacccctgacaccctgcagggtgatgaa
aggaacagctggtcagtgtcgatcaatgaaggtcgctgggtgagaggcagctctgctggc
ggctgcaggaacttccctgaaacattctggacaaaccctcagtatcggatgcaactgttc
gaggaggatgacgacgcagaggacggggaggcactctgcactgtagttgtggctctgatg
cagaaaggtcgaaggatgcagcgccatcaaggggccagattcctcaccattggattttcc
atctacgaggtgccgaaggagatgtgtggaaaagatcaacacctgcagaaggacttcttc
ctgtacacagcctccaaagtgaaatgcaagacctacattaatctgcgggaggtgacggag
cgcttccatctgcccccaggagagtatgtcatcattcccacgacctttgagccccatcaa
gagggagagttcattctcagggtcttctctgagaagcggagcacgtctgaggagacggag
aactcaatcgggtctaaccaaatacagcaagacaagaaaaagaaagacaagcctattgta
tttgtgtcagacagagcacgagccaacaaagaaatcgagcatgacggcatcgagggggaa
aggaaaaagaaaccaaagcgaaaactgctcgaatctgaggaggagactgaagaggaaaaa
cagttcagagccatttacaggcagattgctggtgaggacatgcaggtctgtgcaaatgag
ctcaagatgatcatgaggaacgtactctccaaacataatgatataaagacagagggtttc
agccttgagacatgtcggagtatgatcgccttgatggatactgatgggacgggaaagctg
aacctgcaggagttcaaacatttgtggaaaaagatcaaggagtggcagctgatcttcaaa
cgttacgataaagacaaatctggctccatcagtagttttgagatgaggaacgctgttaaa
aatgcagggtttaacctcaacagacagctgtatgacattatagccatgcgctacgcagat
gaacagctcaacatcgactttgacagctacatctgctgttttgtgagactagagggcatg
ttcagagcttttaatgcctttgacaaagacggagatggagtaatcaagctcaacgtcctg
gagtggcttcagctcaccttgtattcttaa
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