Epinephelus lanceolatus (giant grouper): 117270801
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Entry
117270801 CDS
T07331
Symbol
srsf5b
Name
(RefSeq) serine and arginine rich splicing factor 5b
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03040
Spliceosome
ely05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117270801 (srsf5b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117270801 (srsf5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ely03041
]
117270801 (srsf5b)
Spliceosome [BR:
ely03041
]
Common components
Common spliceosomal components
SR proteins
117270801 (srsf5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_5
SET_assoc
Motif
Other DBs
NCBI-GeneID:
117270801
NCBI-ProteinID:
XP_033504576
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All DBs
Position
18:complement(25422588..25429511)
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AA seq
294 aa
AA seq
DB search
MSGCRIFIGRLSPSAREKDVERFFKGYGRIRDIDLKRGFGFVEFDDPRDAEDAVYELDGK
ELCNERVTIEHARVRLRGGRGRGGGGAGGRFSDRYGRGSQNSRSRNPPPMRTENRLIVEN
LSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASGSDLKNAMEKLSGKEINGRKI
KLIEAARKRSRSRSRSESSSRSRSRSRGRSPSRSPRRSRSPAHKTHNRSRSHSGSPAGGA
SSPTPKSKEPAKRSSKTSKSATPPSPPPAQRASVSRSRSRSRSRSRSPSTDSQR
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgagtggatgtcgtatcttcatcggccgtctgagcccctcggccagagagaaggatgtg
gagaggttcttcaaaggatacggccgcatccgagacatcgacctcaagagaggtttcggc
tttgtggagtttgacgaccccagagatgctgaagatgctgtttatgagctcgatggcaaa
gagttgtgcaacgaaagggtgaccattgagcatgcccgtgtacgtctgcgaggcggccgt
ggcagaggaggcggcggtgcaggaggacgtttctctgatcgatatggccgaggctcccag
aacagtcggagccgaaaccctcctccaatgcgcactgagaaccgcctgatcgtggagaac
ttgtcctcccgtgtcagctggcaggacttgaaagatttcatgagacaagctggagaggtg
acatttgcagacgcacatcggcccaagctcaacgaaggggttgttgagtttgcctctggc
agtgatctgaaaaacgccatggagaaactgtctggaaaggaaatcaatggcaggaaaatc
aagctcattgaggcagccaggaagaggtcgagaagtcgttcccggtctgagagctcttct
cgctcacggtcccgttcccgcggtcgctccccatcccgctcccccagacgctcccgcagc
cccgcccacaaaacccacaaccgctcacgctcccacagcggctcccctgccggtggcgcc
tcctccccaacccccaaatcaaaagagcccgccaaacgttcttccaagacaagcaaatcc
gctaccccgccctcccctccaccggcacagagagcctccgtctcccgctcccgctctcgt
tcacgctcccgctctcgctccccttccactgacagtcagcgctaa
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