Epinephelus lanceolatus (giant grouper): 117270875
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Entry
117270875 CDS
T07331
Symbol
hmbox1b
Name
(RefSeq) homeobox-containing protein 1 isoform X1
KO
K24885
homeobox-containing protein 1
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ely03000
]
117270875 (hmbox1b)
Transcription factors [BR:
ely03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
117270875 (hmbox1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
HTH_TSHZ3
AbiJ_NTD3
DUF494
HTH_31
HTH_24
NOC3p
HTH_26
Motif
Other DBs
NCBI-GeneID:
117270875
NCBI-ProteinID:
XP_033504722
LinkDB
All DBs
Position
18:40860266..40897921
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AA seq
505 aa
AA seq
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MSEFSEEPRFTIEQIDLLQRLRRTGMNKQEILHALETLDRLDREHGDKFGRRTSSSSSSS
SCYGVGGANSCTNNSASNTTTSFNNNSTASATTTSSVTCNGNNNGEGGSGDHSAAAASST
TSKISTATQTQFGSGGGLSPSPSNSYDTSPPPGPPPPSAILPSPVSLVALSQNGRDSLAA
TPNGKLSPPRYPVNSAAAARAFGFEATEEDLDIDDKVEELMRRDSSMVKEEIKAFLGNRR
ISQAVVAQVTGISQSRISHWLLQHGSDLSEQKKRAFYRWYTLEKTTPGATLNMRPAPLPL
EEMEWRQTPPPITTAPGTFRLRRGSRFTWRKECLAVMESYFNDNQYPDEAKREEIANACN
AVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIEATILESHGIDVQSPGGHSNSD
DIDGNDFSEQACDLPYFDKRPLSRPFGLYRLEPTSPTQDDSAAHSEHQDPISLAVEMAAV
NHTILALSRTGGVPNDIKTESLEDE
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagttcagcgaggagccgcgcttcactattgagcagatagatctgctgcagcgg
ctgcgtcgcaccggcatgaacaagcaggagatcctgcacgcgcttgaaactctggaccgg
ctggaccgggagcatggcgacaagtttggccgccgcacctcttcctcctcctcctcctcg
tcctgctacggagtaggcggggcaaacagctgcaccaacaactctgcctctaatactact
acatcattcaacaataacagcactgcctcggcaaccaccacctcttccgtgacatgcaac
ggcaacaacaatggggagggtggctccggcgatcactctgcagccgccgcctcttccacg
acctccaaaatctccactgccacgcagacgcagtttggcagcggagggggactctcgccg
tctccaagcaacagctatgacacctccccgcctccaggcccgccgccgccttctgccatc
ttgccctctccggtctcactggtggctttgtcacagaacggccgggatagcctagctgcc
acgcccaacgggaagctgtctcctccaagatacccagtgaacagtgcggctgcagcgcga
gcatttgggtttgaagctacagaagaggacctggacattgacgataaggtggaggagctg
atgaggagggacagcagcatggtgaaagaggagatcaaagcgttcctggggaacaggagg
atctctcaggcagtggtggcacaagttaccggcatcagccagagcaggatctcccattgg
ctactgcagcacggctctgacctgagtgagcagaagaagagggccttctaccgctggtac
acgctggagaaaactacaccaggtgccactctaaacatgcggccagctccgttacctctg
gaggaaatggagtggaggcaaaccccgccccccatcaccactgcccctggaaccttccgg
ctgcgtcgaggaagtcgcttcacttggagaaaagagtgcctggctgtgatggagagctac
ttcaacgacaaccagtacccagatgaggccaaacgggaggagatagcaaacgcctgcaat
gctgttattcaaaagccagggaagaagctgtctgatctggagagggttacctccctgaaa
gtttacaactggttcgccaaccgtcgcaaagagatcaagagacgggctaacattgaagcc
acaatcctggagagtcatgggatagatgtccagagtccagggggacactccaacagtgac
gacatcgatgggaacgacttctcagagcaggcatgtgacctaccctattttgacaagaga
cctctaagccgaccttttggcctttaccgactggagcccacctcaccaacacaggatgac
agtgcagcacacagcgagcaccaggaccccatctctttggctgtggagatggctgccgtc
aaccacaccatcctggccctgtccagaactggaggggtccccaacgacatcaagacggag
tccctggaggacgaatga
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