Epinephelus lanceolatus (giant grouper): 117271289
Help
Entry
117271289 CDS
T07331
Symbol
cltca
Name
(RefSeq) clathrin, heavy chain a (Hc) isoform X1
KO
K04646
clathrin heavy chain
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04142
Lysosome
ely04144
Endocytosis
ely05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117271289 (cltca)
04142 Lysosome
117271289 (cltca)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
117271289 (cltca)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ely04131
]
117271289 (cltca)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ely04147
]
117271289 (cltca)
Membrane trafficking [BR:
ely04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
117271289 (cltca)
Exosome [BR:
ely04147
]
Exosomal proteins
Proteins found in most exosomes
117271289 (cltca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
117271289
NCBI-ProteinID:
XP_033505341
LinkDB
All DBs
Position
2:complement(27987246..28033950)
Genome browser
AA seq
1679 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQTQVVIIDMADPNT
PIRRPISADSAIMNPASKVIALKDAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTV
ALVTDTAVYHWSMEGDSQPVKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVG
AMQLYSVDRKVSQPIEGHAASFAQFKMEGNSEESTLFCFAVRGQAGGKLHIIEVGTPPTG
NQPFPKKAVDVFFPPEAQNDFPVAMQISSKQDVVFLITKYGYIHLYDLETGTCIYMNRIS
GETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRLAVRNNLAG
GEELFARKFNTLFAAGNYSEAAKVSANAPKGILRTPDTIRRFQSVPTQPGQTSPLLQYFG
ILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKAVDPTLALSVY
LRANVPNKVIQCFAETGQFPKIVLYAKKVGYTPDWIFLLRNVMRINPEQGLQFAQMLVQD
EEPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAI
LGNQMFTNYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLS
VEDSLECLRAMLSANIRQNLQICVQVASKYHEQLTTQSLTELFESFKSFEGLFYFLGSIV
NFSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVVGGLLDVDCSEDVIKSLILVVRGQ
FSTDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPF
YDSRVVGKYCEKRDPHLACVAYERGQCDQELINVCNENSLFKRLSRYLVRRKDPDLWASV
LLETNPFRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFS
EHRNLQNLLILTAIKADRTRVMEYISRLDNYDAPDIANIAISNELFEEAFAIFKKFDVNT
SAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKDLVKEAIDSYIKADDPSAYME
VVQAADKSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQ
QVGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFA
CVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTE
LAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEFDNAIITMM
NHPTDAWKEGQFKDIITKVANVELYYKAIQFYLEFKPLLLNDLLIVLSPRLDHSRAVNFF
TKVKQLPLVKPYLRSVQNHNNKSVNEALNNLFITEEDYQALRTSIDAYDNFDNISLAQRL
EKHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDIELAEELLSWFLQ
EDKKECFAACLFTCYDLLRPDVVLETAWRHNIMDFSMPYFIQVMREYLSKVDKLETSESL
RKEEEQATETQPIVYGTPQLMLTAGPSVPVPPQPAYGYGYQAPAGYSQPAAQPGFGYGM
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatcctgcctattcgctttcaggagcacctgcagctccaaaacttagggatc
aatccagccaacataggcttcagcaccctaaccatggagtcggataagttcatctgtatc
cgggagaaggtgggcgagcagactcaggtggtgatcattgacatggcagaccccaataca
cctatccgcaggcccatctcagccgacagcgccatcatgaatccagccagcaaagtcatt
gcacttaaagacgccgccaaaacccttcagatcttcaacatcgagatgaagagcaagatg
aaggcacacaccatgacggacgatgttaccttctggaagtggatctcccttaacacagtt
gcacttgtgactgacactgctgtctaccactggagcatggagggtgactcacagcctgtg
aaagtctttgaccgccactctagcctggcaggctgccagatcatcaactaccgcactgac
gccaagcagaagtggctcctgctcattggcatctcagcccagcaaaatcgggtggttgga
gccatgcagctctactcagttgacagaaaggtgtcccagcccattgaaggccatgctgcc
agcttcgcccagttcaagatggaggggaattcagaggagtcaactttgttttgcttcgct
gtcagagggcaggctggagggaagttgcatatcattgaagtggggaccccaccaactgga
aaccaaccatttccaaagaaagcagtggatgtgttcttccctccagaagcccagaatgac
tttcctgtggccatgcagataagctccaagcaagatgtggttttcctcataaccaaatat
ggctacattcatttgtatgatttggagaccggcacctgcatctacatgaaccgcatcagc
ggagagaccatctttgttaccgctccacatgaggccaccgcaggcatcattggagtcaac
aggaagggacaggtgctgtcagtctgtgtggaagaggaaaacatcatcccctacatcact
aatgtgctccagaatccagatctggctctccgcttagctgtccgtaacaacctcgccggt
ggtgaagagctctttgcacgcaagttcaacaccctgtttgctgctggaaactactctgag
gccgccaaggtttctgccaatgcaccaaagggcatcctgcgaaccccagacaccatccgt
cgcttccagagcgttccaactcagccaggccagacctcccccttgctgcagtactttggt
atcctgttggaccagggccagctcaacaagtttgagtccctcgagctctgcaggcctgtc
ctccagcagggacgtaagcagctcctggagaagtggctgaaggaagacaagttggagtgt
tcagaggaactgggtgacctggtgaaggcagtggatcccaccttggctctcagcgtctac
ctgagggccaacgtccccaacaaggtcatccagtgctttgcagagactggtcagttccca
aagatcgtcctgtacgccaagaaggtgggctacactccagactggatctttctgctcagg
aatgtaatgcgaatcaacccagaacaaggcctgcagtttgcccagatgctggtccaggat
gaagaaccgctggctgacatcacacagatcgtggatgtattcatggagtacaacctgatc
cagcagtgcacctccttcctcctggatgctctgaagaacaacagaccctcagaaggacca
ctgcagactcgcctgctggagatgaacctcatgcacgctccacaggttgctgacgctatc
ctgggcaaccaaatgtttaccaactatgatcgtgcccacatcgcccagctgtgtgagaag
gctggactcctgcaaagggcgctggagcactacactgacctctatgacatcaagcgtgct
gtggtgcacacacacctgctcaacccagagtggctggtgaacttctttggctccctgtcg
gtggaggactctctggagtgcctcagggccatgctgtcagccaacatccgccagaacctg
cagatctgtgtgcaggtggcctccaagtaccatgaacagctcaccacacagtctctcacc
gagctctttgagtccttcaagagttttgagggtctcttctacttcctgggctctattgtc
aacttcagtcaggaccctgaagttcatttcaaatacatccaggccgcctgcaagacgggc
cagatcaaagaggtggagaggatctgtagagagagcaactgctatgaccctgagcgcgtc
aagaatttcctcaaggaggccaaactcaccgaccagctaccactcatcatcgtctgtgac
cgctttgactttgtccacgacctggtcctctacctgtaccgcaacaacctccaaaagtac
attgagatctatgttcagaaggtgaatcccagccgtctgcctgttgtggttggtggactc
ttagacgtggactgctccgaggatgtcatcaagagcctgatcctggtcgtcaggggacag
ttctccactgatgagctggttgctgaggtggaaaagaggaacagactgaagctgctgctg
ccctggctggagtctcgtatccacgaaggctgcgaggaacccgccacccacaatgctctg
gccaagatctacattgacagcaacaacaaccctgaacgcttcctgagggagaacccgttc
tacgacagccgcgtggtgggaaagtactgcgagaagagagacccccacctggcctgtgtg
gcctacgagaggggacagtgtgaccaggagttgatcaatgtctgcaatgagaactccctg
ttcaagagattgtctcgctacctcgtgcgccgtaaagaccctgacctgtgggctagtgtg
ctgctggagaccaaccccttcagacgcccactcattgaccaggtggtgcagacagcgctg
tcagaaacccaggacccagaggaagtatcagtcacagtcaaggccttcatgaccgcagac
ctgcccaacgagctcattgagctgctggagaagattgtgttggacaactctgtcttcagt
gaacacagaaatctgcagaacctgctgatcctcactgcaatcaaggccgaccgtacccgt
gtgatggagtacatcagcaggctagacaactacgacgctcccgacatcgccaacatcgcc
atcagcaacgagctcttcgaggaggcctttgccatcttcaagaagtttgacgtcaacacc
tctgctgtgcaggtgctgatcgaacatattggcaacctggaccgggcctatgagtttgca
gagcgctgcaatgagccggctgtgtggagccagctggctaaggctcagctacagaaggac
ttggtaaaagaggccatcgactcctacatcaaagccgatgatccctctgcgtacatggag
gtggtccaggctgctgataagagcggtaactgggaggacttggtcaaattccttcagatg
gctcgtaagaaggcccgtgagtcctacgtggagacagagctcatctttgccttggccaaa
accaaccgcctggctgaactggaagagttcatcaacggacccaacaacgctcacatccag
caggttggtgaccgctgttacgatgagaaaatgtacgacgccgccaagctgctctacaac
aacgtctccaactttggtcgtctggcttcgactctggtgcacctcggggagtaccaggct
gctgtggacggcgcccggaaggccaacagcacccgcacctggaaggaggtgtgcttcgcc
tgcgtggacggaaaggagttcagacttgcccagatgtgcggcctccacattgtggtgcac
gctgatgagctggaggagctcatcaactactaccaggaccgcggttactttgaggagctg
atcaccatgctggaggccgccctggggctggagcgcgctcacatggggatgttcacagag
ctggccatcctgtactccaagttcaagccacagaagatgagggagcatctggagctcttc
tggtccagggtcaacatcccgaaggtcctgagagcagcagagcaggctcacctgtgggcc
gagctcgtcttcctgtacgacaagtacgaggagttcgacaacgccatcatcaccatgatg
aaccaccctacagatgcctggaaggagggacagttcaaagacattatcaccaaggtggcc
aacgtagagctgtactacaaagccatccagttctatctggagttcaagcccttgttactg
aatgatttgctcatagtgctttctcccagactggaccactcccgtgctgtcaacttcttc
accaaggtgaaacagctgcctctggtcaaaccctacctgcggtcagtacagaaccacaac
aacaaatcagtcaatgaagcacttaacaacctcttcatcacagaggaggactatcaggca
ctgaggacatcaatagatgcctacgacaactttgacaacatctcactggcccagcgcctg
gagaagcacgagctgattgagttcaggagaatcgctgcttacctcttcaagggcaacaac
cgctggaaacagagtgtggagctctgcaagaaagacaagctctataaggacgccatgcag
tatgcgtcagagtccaaggacatcgagctcgcagaggagctgctgtcctggttcctacag
gaggacaagaaagaatgtttcgccgcctgcctgttcacctgctacgatctgctgcggccc
gacgtggtgctggagactgcctggaggcacaacatcatggacttttctatgccatacttc
attcaggtcatgagggagtacctcagcaaggtagataaactagaaacctcagagtcccta
agaaaagaggaggagcaggcaacagagacgcaacccatcgtctacggcacacctcagctg
atgctgacagcgggccccagcgtacccgtgcccccccagccggcttacggctatggctac
caggcgcctgcaggatacagtcagccagcagctcagccaggcttcggctacggcatgtaa
DBGET
integrated database retrieval system
