Epinephelus lanceolatus (giant grouper): 117271415
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Entry
117271415 CDS
T07331
Symbol
cpdp
Name
(RefSeq) deoxyribodipyrimidine photo-lyase isoform X1
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ely03400
]
117271415 (cpdp)
Enzymes [BR:
ely01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
117271415 (cpdp)
DNA repair and recombination proteins [BR:
ely03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
117271415 (cpdp)
Prokaryotic type
117271415 (cpdp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
117271415
NCBI-ProteinID:
XP_033505440
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All DBs
Position
19:complement(14864371..14874938)
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AA seq
553 aa
AA seq
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MLRCICRSSFFFISPRRYLRLVAHIHQRPISVFTESITTQTIMSDKKRKSASAAADGPSA
KQQKVAPMMKEVKEKAAGGWLKDQVKQQRTEMKEMKFNKKRLRFISDSQKIKQGSEGVLY
WMLRDHRVQDNWALIHAQRLALKENLPLHVCFCLDVPKSELSTLRHYSFMLKGLEEIAKE
CKSLDIQFHLLHGSAADVLPGFVSDRSLGAVVTDFSPLREPLQWLEGVKKALPKDIPLIQ
VDAHNIVPCWVASPKLEYAARTIRGKLTKLLPEFLTDFPLVEKHPHTATRTAKPVDWDKT
LASLPVDRTVAVPEWAKPGTKGGMAMLESFIDVRLKLFDTKRNDPNSAALSQLSPWIRFG
HLSAQRVACQVQRSAKSSGVSVSSFIEELVVRRELTDNFCFYNEKYDRVEGAYEWAQKTL
KDHAKDKRPYLYTREQLEKAKTHDKLWNAAQYQMVAEGKMHGFLRMYWAKKVLEWTTSPE
EALSIALYLNDRYELDGQDPNGFVGCMWSICGIHDQGWAERPVFGKIRYMNYKGCLRKFD
VARFEKKYCPKNL
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgttacgctgcatctgtaggagctcattcttcttcatttctccaaggcgatacttgagg
ctcgttgcccacattcatcagagacccatctcagtattcaccgagtcaatcaccactcaa
accatcatgtccgacaaaaaacgcaagtcagcctctgctgcagctgacgggcccagtgct
aagcagcagaaggtggcccccatgatgaaggaggtgaaggagaaggctgcagggggctgg
ctaaaggaccaagtgaagcagcagaggactgagatgaaggagatgaaattcaacaaaaag
cgccttcgttttatatcagacagtcagaagatcaagcagggctcagagggggtcctgtac
tggatgttaagagaccacagagtacaagacaactgggcgctgatccatgcccagcggctg
gctctgaaggagaaccttcctctgcacgtctgtttctgcctggatgtcccaaaatctgaa
ctgtctactctgagacattacagcttcatgttgaaaggcctggaagaaatcgcaaaggaa
tgcaaatccttagacatccagttccacctgctgcacggttcagcggctgacgtcctcccc
ggctttgtgtcagaccgcagcctgggcgcagtggtgacagacttctcccccctcagagag
cccctgcagtggttggagggtgtgaaaaaggctcttccaaaggacatccctctcatacag
gttgatgctcacaatattgtcccctgctgggtagcatcacctaaacttgagtatgccgcc
aggacgatcagagggaaactcacaaagcttttgccggagttcctcacagactttcctctg
gtggagaaacacccccacacagccacaagaaccgccaaaccagtagactgggataaaacc
ctggcctccctgccggttgaccgaacggtagcagtgccagagtgggctaagccaggcacc
aaaggagggatggccatgttggagtccttcatcgatgtccgccttaaactgtttgacacc
aaacgcaacgacccaaacagtgctgccctgagccagctgtccccctggatccgtttcggc
cacctgtcagcccagcgcgtcgcatgccaagttcagcgcagcgcgaagtcttcaggtgtc
tctgtctcctccttcatcgaggagctggtggtgcgcagagagctgacggacaacttctgc
ttctacaacgagaagtacgacagagtggagggtgcgtatgagtgggctcagaagaccttg
aaagatcacgccaaagacaagaggccatatctctacacgcgtgagcagctggagaaagca
aagacacacgacaaactctggaacgctgctcagtaccagatggtcgctgaggggaagatg
cacggtttcttgaggatgtactgggccaaaaaggttctggagtggaccacgtcaccagag
gaggcgctctcaatcgctctgtacctaaacgatcgctacgagctggacggccaggacccc
aatgggtttgtcggctgcatgtggtctatttgtggcatccacgaccagggctgggcagag
agacccgttttcggaaagatccgctacatgaactacaaaggctgcctgcggaagtttgat
gtagcccggtttgagaaaaagtactgtcccaaaaacctttga
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