Epinephelus lanceolatus (giant grouper): 117271837
Help
Entry
117271837 CDS
T07331
Symbol
depdc5
Name
(RefSeq) GATOR complex protein DEPDC5 isoform X1
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
117271837 (depdc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ely04131
]
117271837 (depdc5)
Membrane trafficking [BR:
ely04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
117271837 (depdc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEPDC5_CTD
IML1
IML1_N
DEP
Motif
Other DBs
NCBI-GeneID:
117271837
NCBI-ProteinID:
XP_033506185
LinkDB
All DBs
Position
19:30390049..30424792
Genome browser
AA seq
1594 aa
AA seq
DB search
MKTNKSYKLVLHKKGFGGSDDELVVNPKVFPQVSLRDIIEIAHPTDEYSPLLLQVKSLKE
DLQKETISVDQTVAQAFKLRAYQDVIVNIVDPKDVTLDLVELTFKDQYIGRGDMWRLKKS
LVSTCAYVTQKVEFAGIRAQASELWVKGEKVTCGYISEDTRVVFRSTSAMVYIFIQMSCE
MWDFDIYGDLYFEKAVNGFLSDLFAKWKEKNCSHEVTVVLFSRTFYNAKSIDEFPEILRG
SIRQDHEGRFYEDFYRVVAQNERRDEWTSLLVTIKKLFIQYPVLVRLKEADGFPVGNNST
AAQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFEVDRLLMILTKQRMIDN
GIGVDLVCMGEQPLHAVPLFKLHNRATPGDSRVGDDYNLPHWINHSFYTSKSQNSCSSFT
PRIKLAGRKLHAEKFKSSKDHTLCATKDSENSLPIQVDYDAYDAQVFRLPGPSRIQRSTN
FRMGRDKETSGRKSWGSVDVSAGIGASPPIRSGGPDEQRSLASDDSLGPVSNMLLIPRMP
PAQYEVSSSLGYTSTRELLEKMMDSQRDSSAPGRFTVGSAESTLHIRPGGYTPQRALINP
FTPSRMPMKLTSNRRRWMHTFPVGPSGEAIQIHHQTRQNMAELQGSQQRDPAHTSAELLE
LAYHEATGRRTTSRHAGENGVCIGGGMEEFTGSPGSNYSGTLTNRGSTFEDLSLSGSDPI
LLLSAPPTVPSFCCTVGVDWKSLTTPACLPLTTDYFPDRQTLQNDYTEGCYDLLPHSDLE
RREDEAPVMSASQVFEEFICQRLMQGYQIIVQPNNRKPQPAVATPLGSSPLYSRGLVSLR
RAEEEETVYWLSMGRTFHKVCLKDKIITVTRYLPKYPYESAQIQYSYSLCPPHSDAQFVS
CWVEFGHERLEEYKWNYLDQYICSAGSEDFSLIDSLKFWRTRFLLLPAGGARRVADGEGH
WDVYGEGAGAGMGGSGDWVLLDGFIRFLEGLNRIRRRHRSDRIIRQKGTPMKGLQVTSPL
PPYPTEPVVPPQGKKGTSALSALLEMEQNQKTLEEQQQQQQQQQAKPSTAISDPASVATA
PTYVDSPRKDAAFILDFIRSPRSSYIYHSQLPGEASEAADKGVQPAVTAGAAAQPAVETA
VSSSTSDTSGQCAAGALSLSSSSTLLEILEAIKHPTTGIQLLPEQKGLPLNCFISAEVVH
WLVNNVEGVATQGMAVDVMQKMLDEGLVAHASGDAMRTFVYGFYFYRIVGEKDGQTSQLP
TTAAGGWSPAALEDFALFQRKWFEVAFVLEERRPCDLPAFLLPWLPSRPASYASRHSSFS
RSFGGRSQAAALLAATVPEQKTVTLDVDVNNRSDRTEWCSCYYHGNFSLNSAFEIKLHWM
AVTAAVLFEMVQGWHRKAASCGFLLVPVLEVPFALTSYLYGDPLRAQLFIPLNIHCLLKN
SSDNLFEGFEPETYWDRMQLFQEAILYRFGFVHDKFSASAFNFPSENKPQYIHVTGTVFL
QLPYSKRKYSSGQQRRRRNSTTSNSQGPFGGEERVGYYWAYNTMLTKAWRTGVLGDERLA
DRLLRDFTDFCANKDNRLLNLWDSCQEKMNASAP
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccaataagtcgtacaagcttgtgctgcacaagaaaggttttggtggaagtgat
gatgagttggttgtcaacccaaaagttttccctcaagtcagtctgagggatataatcgag
atcgcacaccccacagatgaatacagtcctctcctgctgcaagtgaagagcctaaaagag
gaccttcagaaagagacgatcagtgtggaccagactgtagctcaagccttcaagttgcgt
gcctaccaggatgtcattgtcaacattgtcgacccaaaggatgtaacacttgacctggtg
gagctgaccttcaaggatcagtacatcggcagaggggacatgtggagactaaagaaaagt
ctggtgagcacctgtgcttatgtgacacagaaagtggagtttgcaggaatcagggcccag
gccagtgaattgtgggtgaaaggagagaaagtgacctgtgggtacatcagtgaagacacc
agggtggtgttcagatccacatctgcaatggtgtacatctttatccagatgagttgtgag
atgtgggactttgacatctatggggatctctactttgagaaggctgtaaatggtttcctc
tctgaccttttcgccaagtggaaggagaagaactgcagtcatgaagtgacagttgtactt
ttctcacgtacattctacaatgccaaatctatcgatgaatttcctgagatcctgagaggg
tccatcagacaggatcatgagggacgtttttatgaagacttttacagggttgttgctcag
aatgagagacgggatgagtggacatcactactggtcactatcaagaagctcttcattcag
tatcctgtcctggtgcggctcaaggaagcagatggttttcctgttggtaacaactcaact
gctgctcaaggaaactacctggaggccattaacctttccttcaatgtgtttgacaagcac
tacatcaaccgaaactttgaccgcacaggccagatgtcagtggtcatcacacccggggtg
ggagtgtttgaagttgaccgtctgcttatgattctcactaaacagcgtatgattgacaac
ggtattggggtagacttggtgtgtatgggggagcagccactgcatgcagtaccattattt
aagttgcacaacagggcaacacctggagactctcgtgttggagacgactataaccttcct
cactggatcaaccacagcttctacacctccaaaagtcagaactcatgtagctccttcacc
cctcgaatcaaactggctggtcgcaagcttcatgctgagaaatttaagagcagcaaggac
cacactctctgtgctacaaaagactctgaaaacagcctaccaattcaggtggactacgac
gcctatgatgctcaggtgttcagactgcctggtccttcacgaattcagaggagtaccaac
ttcaggatgggtcgagacaaagagacaagtgggaggaagagctggggctcagtggacgtc
agtgcaggcataggcgcgtcccctcctattcgctctggaggtccggacgaacagcgtagc
ctggcttctgatgatagtctgggccctgtgtccaacatgctgcttatacctcgcatgcct
cctgcccagtatgaagtcagcagctccctgggatacaccagcaccagagagttgttggag
aagatgatggactctcagcgggactccagtgccccgggcaggttcacagtgggaagtgct
gaatccaccctgcacattcgtccaggaggttacaccccacagagagcactcataaacccc
ttcaccccatccaggatgcccatgaagctcacttccaaccgacggcggtggatgcacacc
tttcctgttggtccttctggagaagcaatccagatccatcaccagaccagacagaacatg
gctgaactgcagggcagccagcagagagatcctgcacacacctccgctgagctgctggag
ctggcctatcatgaggccaccggaaggcgaactacctccagacatgcaggggagaacggc
gtttgcattggtggagggatggaagagtttacagggagtccagggagcaactacagtgga
actctaaccaaccgtggctccacatttgaagacctttccctcagtggttcagatccaatc
ctgctgctgtctgcacccccgacagtgcccagcttctgctgcacagtgggggtagactgg
aagtctctgaccacaccggcctgcctgcccctcaccaccgactacttccccgaccgccag
acgctacagaacgactacactgaaggatgctatgacctgctgccacacagcgacctggag
aggcgagaagatgaagctccggtgatgagtgcgtctcaggtgtttgaggagtttatctgt
cagaggttgatgcaaggctaccagatcatcgttcagcccaataacaggaagccacagccc
gctgtggccactccactcggcagcagtcctctttactccagaggtttggtatcactgcgt
cgagctgaggaggaggagacagtttactggctcagtatgggccggaccttccataaagtt
tgtctcaaagacaagatcatcactgtcactcgctacctgccaaagtacccgtatgagtcg
gcacagatccagtacagctacagtctgtgtcctccacactctgatgctcagtttgtgtcc
tgctgggtggagtttggccatgagaggctggaggaatacaagtggaactacctggaccag
tacatctgctctgctggctctgaggacttcagtttgatcgactctctgaagttctggagg
acccgcttcctcctgctgccagccggaggagctcggcgggtggcagatggggaggggcac
tgggatgtgtatggggagggagcaggtgctgggatgggtggcagcggggactgggtcctg
ctggatggcttcatccgcttcctggagggtctcaaccgcattcgacgacgccatcgttcc
gataggatcatcaggcagaagggcacaccgatgaaaggactgcaggtcaccagtcctctc
cctccatatcccaccgagccagtggtacccccacagggcaagaaaggcacatcagcttta
tcagctttacttgagatggagcagaaccagaaaacactggaagaacaacaacagcagcag
cagcagcagcaggcaaagccctcaacagccatcagtgaccctgcaagtgttgccaccgct
cccacatatgtagacagtccccgcaaggatgctgcctttattttggattttatacgtagc
cctcgctcctcctacatctatcactctcagttgcctggcgaggccagtgaggctgcagat
aaaggagtccagccagcagtgacagctggagcagcagcacagcctgcagtagagactgca
gtcagcagcagcacctcagacaccagtgggcagtgtgcagcgggagccctttctctgtcc
tcttcctcaacactcttggagatcctggaggccatcaaacatcccacgacaggcatacaa
ctgctcccggagcagaaaggcctaccgctcaactgttttataagcgcagaagtcgttcat
tggctggtcaacaatgtggagggtgtggccacacaggggatggctgtggatgtcatgcaa
aaaatgctggatgaaggtttggtggcccacgcttccggagatgccatgcgcaccttcgtc
tacggattctacttctacaggatagtaggagagaaggatggccagacgtcccagcttccc
accacggcggctggaggctggtctcctgcagccctggaggactttgctctgttccagagg
aagtggtttgaggtggcctttgtgctggaggagcggagaccttgcgacctcccagcgttc
ctcctgccttggctgcccagccggccagcctcctacgcaagtaggcacagctccttcagc
cgcagctttgggggacgcagccaggccgcggcactgctagcggctacagtcccagagcag
aagaccgtcactttggatgtggacgttaacaaccgcagtgaccgaaccgagtggtgcagc
tgttattaccacggaaacttctcccttaactctgcctttgagatcaagctgcactggatg
gctgtgactgctgcagtgctctttgagatggttcaagggtggcaccggaaagcagcatcc
tgcggcttcttgctggtccctgtgctggaggttccttttgcgctgacctcgtacctgtat
ggagatccactgagagcccagctcttcatccctctgaacatccactgtctgctgaagaac
agcagcgacaacctttttgaaggttttgaaccagagacatactgggacaggatgcaactc
tttcaggaagctatactctacagattcggctttgtgcatgacaagttttctgcttcagct
tttaatttcccctctgagaacaagccccagtacatccacgttacaggcaccgtgttcctg
cagctgccatactccaaaaggaagtactcaagcgggcagcagcgcagacgcagaaactcc
accacctccaacagccaggggcctttcggtggcgaggagcgggtcggatactactgggcc
tacaacaccatgctgaccaaggcctggaggacaggcgtgctgggggacgagaggctcgcc
gatcggctgctcagggacttcacagacttctgtgccaacaaggacaacagactgctcaac
ctctgggacagctgccaggagaaaatgaatgccagtgctccctga
DBGET
integrated database retrieval system
