Epinephelus lanceolatus (giant grouper): 117271859
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Entry
117271859 CDS
T07331
Symbol
smg7
Name
(RefSeq) protein SMG7 isoform X1
KO
K14409
protein SMG7
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117271859 (smg7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ely03019
]
117271859 (smg7)
Messenger RNA biogenesis [BR:
ely03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
117271859 (smg7)
mRNA cycle factors
Common to processing body (P body) and stress granule
117271859 (smg7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
Motif
Other DBs
NCBI-GeneID:
117271859
NCBI-ProteinID:
XP_033506238
LinkDB
All DBs
Position
19:complement(1180545..1207519)
Genome browser
AA seq
1206 aa
AA seq
DB search
MNLCAQYLRQAEALKADMTDSKLGAAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDLW
NHAFKNQITTLQSQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRV
KSSQLGIISNKQSNTSAIVTPQPSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQL
VPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEVK
TKWSVSDFIRAFIKFHGHVYLSKSLDKLDGLREKLEEQFQRLILQKAFSSQQLVHITVIN
LFELHHLRDLTADGSEQSYSSEQQISWFQLLGLFMSFLGVMCSRALLNKSRGEEIMGECP
LPAIKVSLDWLKLRPSVFHEAAVDQRQHIWPWLVSILNSFQPKEDDVSCSSVTPLPEEFE
LQGFLALRPALRSLDFTKGHQGILVDRDGLPVHTRHQRLISLGKWVADNQPGLIQCRVSE
DGLLLFITDIPEQAIEEPQEKEAPVLQESSNAEQTANDGGNSGLKSVLSAGKTQSSWPDS
SDRPVVTFKENIKPREQSREPTRNHHLKDSGKERRDFTKGNGAAGKGELKRDAKRKSELK
KAGHEKTADAGKQVKAQTELRKTPVSEAKKTPATQTQTTCSSQFIPIHHPGAFPPLPSRP
GFPPSAYVIPPPVAFPGLQVNPGFTFSTGVSVPGPFLQPGVHTQAGTQAGKQSHIPYSQQ
RPSGPGPGQGPGSSGQGPGPMNQGPSQGQQPQPQALQQSVQLQVQAMSQQQQQSPTKPVQ
QVGMGKSPPHHPGLQQQYMQVQDQPAQMWNQAQAALQKIPPMQMSLKQPQQQQQQQQQQQ
QQQQAFYMAAQDPLKLYEHQLQPPSQPQLSNMDKKIKYPNMKMQDFYWEPSYRMGDGLAV
MADRMKRPPPGGLCSEQDGSAGPRGPPFEDNKSSPLLPPDLLKTLADFEEEEELVFSKPP
DFFQALAGPLSTAPGPNIFLPNQTRMESGPEVVSQSSSLLPMSGFPMQEYNQNSIFSQAY
GKNLPPSSKPDAPMMHQEPSLYSLFEGTPWSPSLPASSDHSTPASQSPHSSNPSSLPSSP
PTHNHGAMPFSNFGPIGTPDSRDRRVVDRWKADKTGAVSGFGLDYLPAAASSAASDTSWH
QAGPTGSSWTNQESPMEESSSTVLLDSLKSIWSSSMMQPGPSALEQLLLQQKQKQQRGHG
TMNPPH
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgaacctctgcgcccaatatctccgacaggcagaggccctgaaggctgacatgacagat
tcaaagctgggggcggcagaggtgtggacgtcccggcaggccctgcaggatctgtaccag
aagatgctggtgaccgacctggagtacgctctggacaagaaggtggagcaagacctgtgg
aatcatgcttttaagaaccagatcactacgctgcagagccaggccaagaaccgagccaac
cccaaccgcagcgaggtccaggccaacctgtcgctgttcctggaggcagctagcggcttc
tacacacagttactgcaggagctgtgcaccgtgttcaacgtggacctgccgtgtcgcgtc
aagtcgtctcagctcggcatcatcagcaataaacagagcaacaccagcgccatcgtcacc
ccgcagcccagctcctgctcctacatctgccagcactgcctcgtccacctgggagacata
gcacgttaccgtaaccagaccagccaggctgagtcgtactaccgacatgcagctcagctg
gtcccatcaaacggtcagccttacaaccagctggccatcctggcctcctctaaaggagac
cacctcaccaccatcttctactactgccgcagcatcgcagtcaagttccccttcccagca
gcctccaccaacctgcagaaggccctgtccaaggctctggagagccgtgatgaggtgaaa
accaagtggagcgtgtcagattttatcagggccttcatcaagtttcacggtcacgtctac
ctgagcaagagtctggacaagcttgacggtctgcgggagaaactggaggagcagtttcag
aggctgatcctgcagaaagccttcagctctcagcagctggtccacatcaccgtcatcaac
ctgttcgagctccaccacctcagagacctgacagctgacggcagcgagcagagctacagc
agcgagcagcagatcagctggttccagctgctcggactcttcatgtccttcctgggcgtc
atgtgcagccgagctctgctcaacaagagccgaggggaggagatcatgggggagtgtcct
ctgccggccatcaaagtctctctggactggctcaaactgagacccagcgtcttccatgag
gccgctgtggaccaaaggcagcacatctggccctggctggtctccatcctcaacagtttc
cagcccaaagaggacgatgtgtcctgttcctcagtgacgcccctgccagaggagtttgag
ttgcagggtttcttggcgctccgcccggctctgaggtccctggacttcactaaaggtcac
cagggcattttggtggacagggacgggctgccggttcacactcgacatcagagactcatc
agtctgggcaaatgggtggccgacaaccagccggggctgatccagtgccgagtgagtgag
gacggcctcctcctcttcatcactgacattccagagcaggccatcgaggagccgcaggag
aaggaggcgccggtgctgcaggagtcgtccaacgctgagcagacggccaatgacggcgga
aactccggcctgaagtcggtgctgtcggcggggaagactcagagctcgtggcccgacagc
agcgaccgacctgtagtcaccttcaaggagaacatcaaaccccgagagcagagccgagag
cccacgcgaaaccatcatctgaaagacagcggcaaggagcgccgagacttcaccaaaggc
aacggggctgctgggaaaggagagctgaagagggacgccaagaggaagagcgagctgaaa
aaagccggacatgagaaaactgctgatgctggaaaacaggtgaaggcgcagacggagctg
cggaagactccggtgtctgaagcgaagaagactcctgccactcaaactcaaactacctgc
tcctcccagttcatccccatccatcatcctggagccttcccgccgctgcccagcagacct
ggtttccccccctcagcctacgtgatcccgcccccagtggcgttcccaggacttcaggtg
aatccaggtttcaccttctccaccggagtgtccgtccctggaccgttcctccagccgggc
gtccacacccaggccggcacccaggccgggaagcagtcccacattccctacagtcagcag
aggccctctggtcccggtccaggtcaggggccagggtcctcgggacagggcccggggccc
atgaaccagggcccctcccagggtcagcagccccagccccaggctctgcagcagtcggtc
cagctgcaggtgcaggcgatgagccagcagcagcagcagtctcccaccaaaccagtccag
caggtcgggatggggaagagtccacctcaccacccggggctgcagcagcagtacatgcag
gtccaggatcagccggctcagatgtggaaccaggctcaggctgctctgcagaagatccct
cccatgcagatgtccctgaagcagcctcagcagcagcaacagcagcagcagcagcagcag
cagcagcagcaggccttctacatggcggctcaggatcctctcaaactgtacgagcaccag
ctgcagccgccctcccagccgcagctctccaacatggacaagaagatcaagtaccccaac
atgaagatgcaggacttctactgggagccgtcgtacaggatgggcgacggtctggctgtg
atggcagacaggatgaagaggcctccgccaggtggtctctgctctgagcaggacggctcc
gcagggccccggggtcccccgtttgaggacaacaagagctcgcctcttctacctcctgac
ctgttaaaaactctagcagattttgaggaggaggaggagctcgtcttttctaagcctcct
gatttcttccaggccttggctggccctcttagcactgctcctggaccaaacatatttctg
ccaaaccagaccaggatggagagcggccccgaggtcgtcagccagtcatcttctctcctg
cccatgtccggcttccccatgcaggagtacaaccagaacagcatcttcagccaggcctac
ggcaagaacctgccgcccagctccaagcctgacgctcccatgatgcaccaggagccctcc
ctctactccctgtttgaagggactccctggtccccctccctccctgccagctcagatcac
tccaccccggccagccaatcccctcactcctccaaccccagcagcctgccatcgtcccct
ccaacacacaaccacggagccatgcccttctctaacttcgggcccattggcactccggac
agtcgggaccgcagggtggtggaccgctggaaggccgacaagaccggagcggtcagcggc
ttcggtctggactacctgccggctgcagcttcctctgcagcttcagacaccagctggcac
caggcggggccgaccggcagctcctggaccaatcaggagtctccgatggaggagtcgtcc
tccaccgtgctgctcgacagcctcaagtcgatctggtccagctccatgatgcagccaggc
ccgtcggcgctggagcagctcctcctgcagcagaaacagaagcagcagcgaggtcacggc
accatgaacccgccccactga
DBGET
integrated database retrieval system