Epinephelus lanceolatus (giant grouper): 117271871
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Entry
117271871 CDS
T07331
Symbol
rb1cc1
Name
(RefSeq) RB1-inducible coiled-coil protein 1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117271871 (rb1cc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ely01009
]
117271871 (rb1cc1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ely04131
]
117271871 (rb1cc1)
03029 Mitochondrial biogenesis [BR:
ely03029
]
117271871 (rb1cc1)
Protein phosphatases and associated proteins [BR:
ely01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117271871 (rb1cc1)
Membrane trafficking [BR:
ely04131
]
Autophagy
Autophagosome formation proteins
ULK complex
117271871 (rb1cc1)
Mitochondrial biogenesis [BR:
ely03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
117271871 (rb1cc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
ubiquitin
Motif
Other DBs
NCBI-GeneID:
117271871
NCBI-ProteinID:
XP_033506269
LinkDB
All DBs
Position
19:5635040..5653324
Genome browser
AA seq
1622 aa
AA seq
DB search
MKLYVFQVNNGSTLTFDTDLAVQTVLELKHAIQAKYKIAIQHQVLVVNGGECMAAERRVC
SYSAGTETNPIFLFNKEMILCDRDPTIPKTTFSIESEIQVKVEESLLMPAVFHTVASRTQ
LALEMFEVAKKLCSFCERLVHDEHLQHQGWAAIMANLDDCTLSYQKLLVKFDTSYANYQH
DLEEIKVKLSKLGTSVSVMARIPLLECLTRHSYRESIEKSSSTPGKDSDETEEEKSTDSV
LCATDAQKPSKSSASFSASGTATCESTGDQETNEMTDSGGLRAALLDDDDDDAPELANQP
SFNVTLLDWINVQDRPNDVESVVRKCFDSINRLDPRIIQPFLADCRDTIAKLDNQNMKAI
KGLEDRLYALDQMIASCKKLVNEQKELAQGFLANQKRAENLKDTSVLPDLCLSHTNQLMI
MLNNHRKLLDIKKKCTTAKQELANNLQVRLKWCCYVMLHADQDGEKLQALLRLLTELIER
VRVVEALSTVPQMYCLAVVEVVRRKMFMRHYREWAYALVKDGKRLYEAEKFKRESFGKLF
RKSFLRNRLFRGLDSWPPTSFCTRKPRRFDDELPDISLDDLQYLKSCCPVEVQPFLMVPT
MCDFEPLHRHVDTLHQLVQAAQSVDEMSQTITDLLSEQRVSCSQRSTLLTPQSGSIPETT
TPRSSKTPPSLSLQGPSCQPLHVPVPAPLEDLSPDSIDAQTFDFETIGHPNMDPVLQQGS
LDLDSLAESPESDFMSAVNEFVIEENLTSPNPISDPISPEMMVESLYSSVINAIDNKRMQ
DTTILERENSRITVLKQVIDKYRSAAEESHSNFRSVKDDLYHLRGMVLKEQHDFGFVLRN
MTTEVRNIVDNICQTHELELKEQHQSELLSFRQELEKQVQTLTEENQVNQNIVKDVQHAM
LELEGLMERKEKELTQLENEKERWAETESNQTDRIKNLEQMISDQTEEIKTLSASRDSLT
SQLENLHFEIERSQQKIRQELEVVEQSHLKEMEEKLKQEHKAKLETLTKDHQEALEHLAA
EKSAKLSEAADQHATALKEKDNQIKDLEARVTELAELRCKVEVELALKESETEEIRLLFE
EAKMQQAEAVKSQVEAATKVLGDELADIKKQLHVKNEEYEVDLAELRTLMRIEKDHCISE
LVDRHEEETILLRSELSSLQRQAQDAERNHAEQQQKLKQEFDQQSSALSEEKETQFRSFQ
ELEQELRTVISNLQAENDLLSKKLEQDRQAVEKDLEKEEASKFASPDAFKELEQQKEDME
KRLLDKIRQLEKELQERQSSESNVGLSLQAEGRADAGTPLSLDSALQERLQQERASLQSQ
MDLLEKRKNEEMQNLKTSLIAEQQTNFNTVLTREKLKKEQIINDLTEKLRKVTQQQEKDK
ALIETLSEDRASVMQEKKHLEEELNRLRSTALVSSAFFTPNPSAQEITEAGAAARALPVA
GAFSSEPMADTDRLASVAAIREDEQVDSAVEASMVTVHDNILMSEEKQRILLLERTLHMK
EEENKRLSQRLMSQSMSSVSSRHSDKIAIRDFQVGDLVLIILDERHDNYVLFTVGPTLYF
LHSESLTALDLKPASGTSRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNR
KV
NT seq
4869 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtatgtgttccaggtcaacaatggcagcacattgacatttgacaccgatctt
gctgtccaaactgtactggagcttaaacatgccatccaagccaaatataagattgcaatt
caacatcaagtccttgttgtcaatggaggggaatgtatggctgcagagagacgtgtctgc
agctacagtgctggcactgaaaccaaccccatattcctgttcaacaaagagatgatcttg
tgtgaccgggatccaacgatccctaaaaccaccttctccattgagagtgagattcaggtt
aaggtggaggagtctctactgatgccagctgtctttcacactgttgcctcgcgaacacaa
cttgctctggaaatgtttgaagttgccaagaaactttgctctttctgtgaacgattggtt
cacgatgaacaccttcaacaccaaggctgggctgctattatggctaatctggatgactgc
actctgtcttatcagaagttgcttgtgaaatttgacacttcatacgcaaactatcaacat
gacctggaagaaattaaagtcaaactttcaaagttagggacatcagtgtctgtcatggcg
aggatacctctgctggaatgtctgaccagacacagttatagagagagcatagagaagtcc
agctccaccccagggaaggattcagatgagacagaagaagagaagtccactgactctgtt
ctctgcgctactgatgcacagaagccctccaagtcatcagcatccttctctgcttcgggg
acggccacatgtgagtcaactggagatcaggaaacaaatgaaatgactgacagtggtggg
ctgagagctgcgctattagatgatgatgatgatgatgctccagagctcgccaaccagccc
tccttcaatgtcacactgttagactggatcaacgtgcaagaccgacccaatgatgtggaa
tcggttgtgaggaaatgcttcgactccatcaataggcttgaccctcggattattcagcca
ttcctggcagattgtcgtgacacaattgccaagctagataatcaaaacatgaaagccatc
aaggggcttgaggacaggttgtacgctctagaccaaatgattgcaagctgtaagaagttg
gtgaatgaacagaaagaacttgctcagggatttttggccaatcagaagcgggctgaaaac
ctgaaggatacatctgttctgcctgacttgtgtctgagtcacaccaaccagctgatgatc
atgctgaacaaccacaggaagctgctagacatcaaaaagaagtgcaccactgccaaacaa
gaacttgcaaacaaccttcaagtccgactcaaatggtgctgctacgtgatgcttcatgca
gaccaggatggggagaagcttcaggcgctactcagacttctgacggagctaatagaaaga
gtgagggtggtggaggcccttagtaccgtgccccagatgtactgcttggcggttgttgaa
gtcgtcaggagaaaaatgttcatgcgccactacagagagtgggcctacgcacttgtgaag
gatgggaaacgactttatgaggctgagaagttcaaaagggaatcctttgggaaactcttt
aggaagtctttcctcagaaatcgtttgtttagaggactcgattcatggcctccaacatca
ttttgtacacgaaagcccagaaggtttgatgacgaacttccagacatctcacttgatgac
ctgcagtacttgaaatcttgttgtcctgtagaggtgcagcctttccttatggttcccaca
atgtgtgactttgagcccttacatcgccatgtagacacgcttcaccagctggtccaagct
gcacagagtgtggatgagatgtcccaaactattactgacctgctaagtgaacaaagggta
tcctgtagtcagagatcaaccttgttgaccccacagtccggaagcatacctgagactaca
acaccaaggtcctccaaaacccctccctctctcagccttcagggaccgagctgccagcca
ctacatgttcccgtcccagctcctctagaggacttatccccagacagcatagatgcgcaa
acatttgactttgaaaccattggccacccgaacatggatccagtcctacagcagggctcg
cttgacttggattctctagcggagagccctgaatctgacttcatgtctgctgtcaatgag
tttgtgattgaagagaacttgacctctccaaaccccatcagtgaccctatcagccccgaa
atgatggtggagtcgctgtactcttcagtcattaacgctattgacaacaagcgtatgcag
gataccacaatactagagagggagaactcgaggatcactgtcctcaaacaagttattgat
aagtaccggtctgctgcagaggagtctcattccaatttcagaagtgtaaaggatgatctc
tatcacttgagaggcatggtattaaaagaacaacatgactttggctttgttttgaggaat
atgaccacagaggtgcgcaacattgtggacaacatctgccagacccacgaactggaactg
aaggagcagcatcaaagtgagcttctctcctttcggcaagagcttgagaagcaggttcag
acactaacagaggaaaaccaagtaaaccagaatatcgtcaaagatgtccagcacgcgatg
ctcgagctggaaggccttatggagcgcaaggagaaagaactgactcagcttgagaatgag
aaagagcgatgggctgaaacagagagtaaccagactgatagaatcaaaaacctggagcag
atgatcagtgatcaaactgaagagatcaagacgctctcagcttctagagactctctgacc
agccagcttgagaatctgcactttgagattgaacgtagccagcagaagatccggcaggag
ctggaggttgttgagcagtcccacctaaaggagatggaggagaaactgaagcaggaacac
aaggccaaactggagacccttaccaaggatcaccaggaggctctggaacatctggctgct
gaaaaaagtgcaaagttaagtgaggcagctgatcaacatgccactgcacttaaagagaag
gacaaccaaattaaggacttggaggctcgtgttactgagctcgctgaactccggtgcaaa
gtagaggtggagctagccctcaaagagtcagagacagaagagatcaggctcctatttgag
gaggccaagatgcagcaggctgaggctgttaaatcccaggtagaggctgcaaccaaagtc
cttggcgatgagctggcagatatcaaaaaacagcttcatgtaaaaaatgaggagtatgaa
gttgacctagcagagctgaggactctcatgaggattgagaaggatcactgcatctcagag
ctggtggacagacacgaggaggagactattttgttacgcagtgagctctcctccttgcag
cggcaagcccaggatgctgagaggaaccatgctgagcagcagcagaaactcaagcaggaa
tttgaccagcagtcgtcggctctaagcgaagaaaaagaaacgcagttcaggagtttccag
gaactggagcaagagttgaggactgttatcagcaatttgcaggcagaaaatgacctgctc
tccaaaaagctagagcaggacagacaagcagtcgagaaagatttagaaaaagaagaggcc
tctaagtttgcatcaccagatgcctttaaagagttagagcagcagaaggaggacatggag
aagagactcttagacaaaattagacaacttgagaaagagcttcaggagagacagtcctca
gaaagcaatgtggggttgtcgctgcaagctgaggggcgtgcagatgccggaacacctctg
tctctggactcggcactacaggagcggctgcagcaggagagggcctccctgcagtcccag
atggacctcctggagaagaggaagaatgaggagatgcagaacctcaagacatcactaatc
gcagagcagcagactaatttcaacactgttctaacccgagagaagctgaagaaggagcag
atcatcaatgatctcacagagaagttgcggaaagttactcaacagcaggagaaggacaaa
gctctgatagagacactttctgaggaccgagccagtgtcatgcaggagaagaagcacttg
gaagaagagcttaaccgcctgcgcagcaccgcactggtctcctctgccttcttcactcct
aacccctcagctcaggagatcacagaagctggagcagcagcgagagctctgcctgttgct
ggggctttttcctctgagcccatggctgacaccgacagactggcctctgtggcagccatt
cgagaagacgaacaggttgattcagcagtggaagccagcatggtgaccgtccatgacaac
atcctgatgtcagaggagaaacagcggatactcctgcttgagaggactttacacatgaag
gaagaagaaaacaagcgcctcagtcaaagactgatgtctcaaagcatgtcgtctgtgtcg
tcacggcattcagacaaaatcgccatcagagatttccaggtaggcgatttggttctaatc
atcctggatgaaaggcatgacaactacgtgctgttcacagttggtcccaccctctacttc
ctccactcagagtctctcactgcactggacctcaaaccagcatcagggacctcaagacgg
ccgtgggtacttggaaaggtgatggagaaggaatattgccaagcaaaaaaggcccagaac
aggttcaaggttcctttaggaaccaagttctacagagtgaaagctgttccatggaacaga
aaagtataa
DBGET
integrated database retrieval system
