KEGG   Epinephelus lanceolatus (giant grouper): 117272024
Entry
117272024         CDS       T07331                                 
Name
(RefSeq) RNA-binding protein MEX3B-like
  KO
K15686  RNA-binding protein MEX3 [EC:2.3.2.27]
Organism
ely  Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:ely00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ely03019]
    117272024
   04121 Ubiquitin system [BR:ely04121]
    117272024
Enzymes [BR:ely01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     117272024
Messenger RNA biogenesis [BR:ely03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     117272024
Ubiquitin system [BR:ely04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    117272024
SSDB
Motif
Pfam: KH_1 KH_Vigilin zf-C3HC4_3 KH-I_KHDC4-BBP zf-RING_2 KH_BICC1_1st zf-C3HC4 KH_2 RING_XB3-XBAT31 KH_DEAH11_2nd Prok-RING_4 Mito_fiss_reg zf-RING_5
Other DBs
NCBI-GeneID: 117272024
NCBI-ProteinID: XP_033506577
LinkDB
Position
19:10535091..10544908
AA seq 659 aa
MPSPLFHPEIMDHDVVISSQHNGVGLPRETDQESREEDHQEALRFALDQLSLMALEKVDC
GGGGGSGGGGLVDTLDGTQGPGSEGCNGVGGGGYVDLQMLEHPNGSRDSPTSCSPSPEYY
GSGGYHMAGSHPMLHGEQSSVLCSRKRSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAK
TNTYIKTPVRGEDPVFIVTGRREDVEMAKREIVSAAEHFSMIRASRCKAGGPGGGGGGSL
PGPPHLPGQTTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSREKDPVFEVTGMP
ENVDRAREEIETHITLRTGTFVDLQGDNDFHSNGTDVSLEGLGALSGGLGASLWSRATGH
HSAPPPPPPSPPPPPLPMSMHHSSSRKMSSSVAYHTHNGGMSSDNFSTTRKANEGGSPTS
PFSTGSSSAGGGFTFGGDSTPGLPSSDELGFEFSAANIWAPFVNGGTGNKTGGSAQQQPL
RRNSSGLSGGAITPRLSPTLPQDTGVGPLDHPLARRAQSDPLSTLSWLQSGSAGGGSFSG
ASSSSSGGSSTGYSSCSASSLPGGSPTDSEGGGSGVGLSSGMLSRLKGGSGPGVAGLVGV
SPGINRDCFVCFESEVTAALVPCGHNLFCMECAGQICQSAEPECPVCHTPTTQCIRIFS
NT seq 1980 nt   +upstreamnt  +downstreamnt
atgcctagccctttattccaccccgagattatggaccacgacgtggtgatcagcagccag
cacaacggggtcggtctgccccgagagacggaccaggagtcccgggaagaggaccaccaa
gaggcgctccgcttcgccctggaccagctgtcactcatggccctggagaaggtggactgt
gggggcggcggtggcagcggaggcggcgggctggtcgacactctggatgggacccagggt
cccggctctgagggctgcaacggcgtgggcggagggggctacgtggatctacagatgctg
gagcatcccaacgggtcccgggactcgccgacgtcctgctctccgtccccggagtactac
ggctcgggcgggtaccacatggccggctcgcaccccatgctccacggggaacaaagctcc
gtcctctgcagcaggaaaagaagtgtcaacatgactgaatgtgtgcctgtgcccagctct
gagcatgtggcagagatagtggggagacaaggttgtaagatcaaggccttacgtgccaaa
acaaacacttacataaagactccagtcagaggcgaggatccggtgttcattgtgacggga
cgcagggaggatgtggagatggccaaacgtgaaattgtctccgccgctgagcatttctct
atgatccgggcgtcccgctgcaaagccggagggcccggaggaggaggcggcggctccctt
cccggaccgccacacttacctggacaaaccaccatacaggtgcgggtgccctacagagta
gttgggttagttgttggaccaaaaggagcaactatcaagcgcatccagcagcagactcac
acctacatcgtgacgcccagtcgagagaaagacccggtgttcgaggtgaccggcatgccg
gagaacgtggaccgagcgagggaggagattgagacccatatcaccctgcgaactggaacc
tttgtagacctgcagggagacaatgacttccactccaacggcactgacgtcagtctagag
ggcctcggcgccctgagcggaggcctgggggcatctctgtggtccagggctaccggccac
cattctgccccccctcctcctccaccctccccacctcctcctcctctccccatgtccatg
caccactcctccagccggaagatgtcctcatcagttgcctatcacacgcacaacggcggg
atgagctcagacaacttcagcaccactcgcaaggccaatgagggcggcagccccacgagc
ccctttagcacaggctccagcagcgctggaggaggattcactttcgggggcgactccacc
ccagggctgccctcgtcagatgaactgggctttgagttcagcgctgccaacatctgggcg
cctttcgtcaacggtggaacaggcaataagacgggtggctctgcccaacagcagcctcta
cgtcgcaacagcagcggcctcagcggcggagccatcactccacgattgtctccaactctg
cctcaggacacgggcgtgggccccctggatcacccattagcccgtcgtgcacagagcgac
cccctcagcactctctcctggctgcagtccggcagcgcaggaggcggctccttctccgga
gcgtccagctccagctccggcggctcgtcgactggctactcctcctgctcggcctcctcc
ctgccaggcggctcgcccactgactccgagggaggcggcagcggcgtgggcctcagctcc
gggatgctgagccgactgaaaggcggctccggccccggggtcgcgggcctggtcggcgtt
agccccgggatcaacagggactgctttgtgtgtttcgagagcgaggtgacggcagccctg
gtgccttgtggccacaacctgttctgcatggagtgcgctgggcaaatctgccagtcagct
gagccggagtgccccgtctgccacacccccaccacacagtgcatccgcatcttctcctaa

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