Epinephelus lanceolatus (giant grouper): 117272068
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Entry
117272068 CDS
T07331
Name
(RefSeq) C-myc promoter-binding protein-like isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ely04131
]
117272068
Membrane trafficking [BR:
ely04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
117272068
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
DUF2464
PPR_3
PPR_long
PPR
Motif
Other DBs
NCBI-GeneID:
117272068
NCBI-ProteinID:
XP_033506729
LinkDB
All DBs
Position
1:46394017..46494965
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AA seq
2002 aa
AA seq
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MMEDKGPRVADYFVVAGLTDPSKPLDQEIHFDDVCHKTAKPKAPITDVAVVVRSMGEEIP
PGFTCIEETPTGHSADLNNGGLMAPQIFLCYRRGRDKPPLTDLGVLYEWKERLKQGCHLI
QTTPSGRPANISGNSSQRIYVTYRRAPESQPHSALAVTDICIIIPSKGETPPHTFCKVEK
NLNSSMWGSSVYLCYKKSVAKTNTIAYKAGLFSRYPEEDYESFPLPESVPLFCLPMGATI
ECWPANTKYSLPVFSTFVLTGASGEKVYGAAIQFYEPFPQECLTDQQRSQLGLLNPDPPK
PSSSSRTGSATSSTTNSTATAPSLVHTNKCICLLSHWPFFDAFRKFLTFLYRYSISGPHA
LPIEKHISHFMHKVPFPSSQRPRILVQLSPHDSLMLSQPVSSPLPLSGGRFSTLLQNLGP
ENAVTLLVFAVTEHKILVHSLRPAVLTSVTEALVSMIFPFHWPCPYIPLCPLALADVLSA
PCPFIVGVDSRYFDLYDPPPDVSCVDLDTNTIFHTEDKRALTWKILPKKACKNLMNVLSN
LYQQLVDGHQRPDGLLELSMSDSSELSCGKSLHTLELEIQEAFLRFMAAILKGYRSFLRP
ITQAPSEKATDASSLFDLQGFLKSRDRSHQKFYSLMTKTQMFIRFIEECSFVSDKDASLA
FFDDCVDKLYNSERSADKGGKVDSDRPEETRLIEIDESQRSEHTVFITPPELPPLPEGEE
HPLCYRYDGFPVLSLDLFDPVEGLRTPSSRLAARHSCPTSPAPMFRRTKQEIKSAQKIAK
KYSSIPQLWSKCLLRHCYGLWFICLPAYVKVCHSKVRALRTAYDVLRKMQAKKLQPPDEV
CYRVLMQLCGQYGQPVLAVRVLFEMKKAGVHPNAITYGYYNKAVLESTWPSSTRGGYFLW
MKLRNVVLGVAQFKRALRRHAPLTQSPLSDGSDLDAVSHGSLDSSADTNLAEQGPYTTDS
AKVDPTDDRSSTGDQSDLGYNSLSKEEVRRGDPTAQESAPDKDDKKESDCSSLSETESAK
GSKDCLPQLDMEVQSFKPRGIVRSSCPYDDSSCKPKSSASAGHVAGLLFTSSLDEIGEVH
TNSLLRRHKSALEEVVGSASSGSALDWQGVRGLRLSGDAVGSCGSGTTVLGLGMSQGETD
PDKIAGHLGADVKILSGANFSKSKRPRSLALGGLEAVAAKVGASKCQEHREEDEEREGQD
SSDEDRSNTDAIFDLEDLDLDKPATGAGMSSHKLSKSHKKPVKRSISYGGISSVTSRGTV
KRTDIQTGYDPLSLLAAESQTEQQNEDQYPEGEGASTPSARRHLAREIELYMNHMGSPLS
SRTPSLDLPDPASPLLLHPSSLSAPRRASLPHTSPLRTAGMPRSRTFHPPSPSQPISRQR
LLSSPSCRSSSTTPSASPRPSPYRERADRMSLASPSPSSSSFALDTLLTPTLDVFKTSMV
SAGKGVAEKASRWYSRLATYTTPTKDGHSDRLSVSSLGVGDPDCSSLLDEADCGESEGSV
ISPPRNGPRRSPRRSPLRSRLDSPPAGSNVGRPSSLLPECVLSPPGFPLPEKSDLGSSRY
TSNTSIFNNYAMELLISSCSRCKTCDCLVYDEEIMAGWTADDSNLNTTCPFCGNPFLPFL
NVEIRDMRGPGRLFLKGSPSVDEAMTSSYSASTGLDTGTSTLSTPCPTTAVFPPSPVIAV
QECSGAGRTRSTRAQGINIPSERRQGSLSPGAPMARSVSAFGPLDEASRVNRCMPTSGSL
PSRLNEAMDPLSMEWRLHNPEPVTVPYLSPLVLWKELESLLENEGDPVITEADMVDHHPI
IYWNLVWYFRRLDLPSNLPGLILTSEHCNTDSQVPRHWMSEDSKHVLIQILWDNLKLHQD
SIQPLYILWNTYRLNCTLLLENVGYPLSRPVPEEEKPFSEELLQSVVRSIQRNDVSRPMA
QLLQLLGQTLGVKRQRSLYRDILFLSLVALGKDNIDIDAFDREYKLAYDRLVPSLVKLTH
NCDRPPSTGVMECRRTFGEPYL
NT seq
6009 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggacaaaggccctcgtgtagccgactactttgtggtggccggtctgacggac
ccgtccaagccgttggaccaggagatccactttgatgatgtctgccacaagacggccaag
cctaaggcgcccatcaccgatgtggcagtggtagtccgctccatgggcgaggagataccg
ccagggttcacctgcatagaggaaacaccaaccggccattcggctgatctaaacaatggc
ggcctcatggcaccccagatcttcctgtgctacaggcgaggtcgggacaagcctccactc
actgacctgggtgtgctgtacgagtggaaggagaggctgaagcagggctgccacctcatc
cagaccacaccctccggtcgcccagccaacatcagcggcaactcctcccagcgcatctat
gtcacctaccgacgggcgcctgagagccagccgcactccgccctggccgtcaccgacatc
tgcatcattattccaagcaagggagaaacgcctccgcacaccttctgcaaggtggagaag
aatctcaacagcagcatgtggggctcctctgtctacctgtgttacaagaagtctgtggcc
aaaaccaacacaatagcctacaaagcaggtttgttcagcagatatccagaggaggactat
gagtcattccctctgccagagtctgtccctctcttctgccttcccatgggggccacaatc
gagtgctggccagctaacaccaaatactccctccctgttttttccacctttgtcctcacc
ggagcctccggagaaaaggtctacggtgctgccattcagttctatgagccgtttccacag
gagtgtctgactgatcagcagcgctcccagctgggtctcctgaacccagatccacccaaa
ccctcctcttccagccgtactggatcagccaccagcagcaccactaacagcaccgctaca
gccccgagcttggtccacaccaacaagtgtatctgtctgctctcccactggcccttcttc
gacgctttccgcaagttcctcacattcctctatcgctactccatctccggccctcacgct
ctgcccatcgagaagcacatctctcacttcatgcacaaagttcccttcccttcctctcag
aggcctcgcatcctggtgcagctttccccacatgacagcctgatgttgagccagccagtg
tcttctcctttaccgctcagtggtggtcgattttccaccctgctccagaacctcggacca
gagaacgccgtcacattgcttgtgtttgctgtcactgaacacaagatcctggtccactca
ttacgacccgctgtactgaccagcgtcactgaggctctggtgtctatgattttcccgttc
cactggccgtgtccatatatccccttgtgccccctggcgttggctgacgtgttgagtgcc
ccctgtccgttcattgtaggagtggactcccgctactttgatctttatgaccccccgccg
gacgtgagctgcgtggacctggacacaaacaccatcttccacactgaagataagcgagcc
ctcacatggaagatcctgccaaagaaagcctgtaaaaacctgatgaatgtgctgagtaat
ctctaccagcagctggttgatggtcatcagcggcccgatggactgctggagctgagcatg
agtgattcgtcagagctgagctgtgggaagagcctccacacgctggagctggagatccag
gaagccttcctgcgctttatggcagccattttaaaaggctaccgctccttcttacgaccc
atcactcaggcaccctctgagaaagccacagacgccagctcactttttgatttgcaagga
tttttgaagagccgcgaccgctcacaccagaagttctattcgctgatgaccaaaactcag
atgttcatccgctttatcgaggaatgctccttcgtcagcgacaaagacgccagtttggcc
ttctttgacgactgtgtggacaaactctacaattcagagcggagtgcagacaaaggaggc
aaggtggacagtgacaggccggaggagaccaggctgatagagattgatgaatctcagcgc
agtgagcacacagtctttatcacacctccagagctgcctcctctgcctgagggggaggaa
catccactctgctacaggtacgatggtttcccagtgttgagtcttgacctctttgaccct
gtggagggcctgcggaccccctcctctcgcctcgctgccaggcacagctgtcccaccagc
cctgcccccatgttcagacgcaccaagcaggagatcaaatcagcccagaagatagccaag
aagtactcgtctatcccgcagctctggtctaagtgcctgctccgtcactgctacggcctg
tggtttatttgtctgccagcatacgtgaaggtgtgccactccaaggtgcgggctctgcgc
actgcttacgacgtcctcaggaagatgcaggcaaagaaattacagccccctgacgaggtc
tgctaccgggttctgatgcagctgtgtgggcagtatggccaacctgtcctggcggtcaga
gtcctctttgagatgaagaaagctggagtccaccccaatgccatcacttacggctactac
aacaaggcggtgttggagagcacgtggccctctagcaccagaggaggatacttcctgtgg
atgaagctgagaaatgtcgttttgggcgtggcacagttcaaacgggcgctgcgacgacat
gctcccctcacccagagccctctgtcagatggcagtgacctggacgctgtgagtcacggc
agcctggatagctctgccgacactaacctggctgagcagggcccctacaccactgactcc
gccaaagtagaccccactgacgatagatctagcacaggggatcaatcagatttgggttat
aactccctgtccaaagaggaggttcggagaggagaccccactgctcaggagtccgcccct
gacaaagatgacaagaaggagagcgactgcagctccttgtcagagacagagagtgccaag
gggagtaaagactgtctccctcagctggacatggaggttcagtccttcaaaccccgcggc
attgttcgcagcagctgtccatacgacgattcatcgtgtaaacccaagagctccgccagc
gcaggccatgttgcaggtctcctcttcacttcctccctggatgagatcggtgaggttcat
accaacagtttgctcaggagacataagagtgctctggaagaggtggtgggcagcgccagc
agcggctcggctcttgactggcagggtgtgagaggcctccggctgagcggtgatgcggtg
ggcagctgcggcagtggcaccactgtcctcggtctgggtatgagccagggtgaaactgac
ccagacaaaatcgcaggacacctgggcgcagacgtcaaaattctttccggtgccaacttc
agtaagagtaagaggcctcgttcactggctctgggcgggttagaggcagtggcggctaag
gtaggtgcctctaaatgtcaggaacacagggaggaggacgaggagagggagggacaggac
tccagtgatgaggacagaagtaacacagacgccatttttgacttggaggacctggactta
gacaagcctgccacaggggctggtatgagctcccacaaactgagcaaatctcataagaaa
cctgtcaaacgcagcatcagctacggtggcataagctctgtgacgtccagaggaactgtg
aagcgcacagacatacagacaggttacgaccctctatccctgctggcagcagagtcacaa
actgagcagcaaaatgaggatcagtacccagagggggaaggggccagcacgccgagtgcc
cgcaggcacctggccagagagatcgagctatacatgaaccacatgggcagcccgctgagc
agccgtacacccagtctggatctgccggacccggccagccctctcctcctccacccttcc
tcactctctgccccccgcagagccagcctaccccacacctcccccctaaggactgctggg
atgccacgctcccgcaccttccaccctccctcgccctcccagcccatctcacgccagcgc
ctcttgtcatctccttcctgtcgcagctctagcacaactcccagtgccagccctcgacct
agcccctacagggagagggcagacaggatgagcctggcgtcaccttcgccctcctcctcc
tcttttgctctggacactctgctcacaccaacgcttgatgtctttaagaccagcatggtc
tctgctgggaagggtgtggcagagaaggcaagccgctggtactcccgtctcgccacttac
accacacctaccaaggacggtcacagtgaccgactgagtgtgtcctctctcggtgttgga
gatccagactgctcttccctgttggatgaggcggactgtggggagtcagagggctccgtg
atctctccaccgaggaatggaccccgcaggagccccagacgcagccctctccgcagcaga
ctggacagcccccctgcaggctccaacgtcgggagaccctcatctctgctccctgaatgt
gtcctctcgccccccggcttccctctgccagaaaagtcggacctcggctcgtcacggtac
accagcaacaccagcatcttcaacaactacgccatggagctgctgatttccagctgttct
cgctgtaagacgtgtgactgcctggtgtacgatgaggagatcatggccggctggacagca
gacgactccaacctgaacaccacctgtcccttttgtggaaaccccttcctgcccttcctc
aacgtggagatcagggatatgcgaggacccggcaggcttttcctgaagggcagcccatca
gtggacgaggcaatgacctcgtcgtactctgcctccacaggtttggacacggggacgtcc
accttgtccaccccctgtcctacaactgcagtctttcctccgtcccctgtgatcgctgtc
caggagtgctcaggggctggaaggactcgatcaaccagggctcaaggtatcaacatcccc
tcagagcgccggcaggggtcgctgtctcccggagcgcccatggctcgcagtgtcagcgcc
ttcggtcctctggacgaagcttcccgagtcaaccgctgtatgccgacgtcaggcagcctg
cccagccgtctcaatgaagccatggacccgctgagtatggagtggcggctccacaacccc
gagccagtgacggttccctacctgagcccgctggtgctgtggaaggagctggagagtctg
ctggagaatgagggcgacccggtgatcacagaggccgacatggtggaccaccatcccatc
atctactggaacctggtgtggtacttcagacgactggacctgcccagcaacctgcccggt
ctcatcctcacctctgagcactgcaacacagactcccaggtccctcgtcactggatgtcg
gaggacagtaaacacgtgttgatccagatcctgtgggacaacctcaagctgcaccaggac
tcaatccagcctctctacatcctctggaacacatacaggcttaattgtactctgttgtta
gagaatgtgggttaccctctgtcccggccggtcccggaggaggagaagccattcagcgag
gagttactgcagagtgtggtgaggagcatccagaggaacgacgtcagccgaccaatggct
cagctgctgcagctgctgggtcagactcttggggtcaagaggcaaaggagtttgtacagg
gacatcctcttcctctctctggtggctctgggaaaagacaacattgatattgatgccttt
gatcgcgagtacaagctggcgtatgaccgcctcgtgccgagcctggtgaagctgacccat
aactgtgaccgtcctcccagcacaggggtcatggagtgccgcaggacgtttggagagcct
tacctgtaa
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