Epinephelus lanceolatus (giant grouper): 117272232
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Entry
117272232 CDS
T07331
Name
(RefSeq) integrin alpha-6-like
KO
K06485
integrin alpha 6
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04382
Cornified envelope formation
ely04510
Focal adhesion
ely04512
ECM-receptor interaction
ely04514
Cell adhesion molecule (CAM) interaction
ely04518
Integrin signaling
ely04810
Regulation of actin cytoskeleton
ely04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117272232
04514 Cell adhesion molecule (CAM) interaction
117272232
04518 Integrin signaling
117272232
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117272232
09142 Cell motility
04820 Cytoskeleton in muscle cells
117272232
04810 Regulation of actin cytoskeleton
117272232
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
117272232
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ely04147
]
117272232
04515 Cell adhesion molecules [BR:
ely04515
]
117272232
04090 CD molecules [BR:
ely04090
]
117272232
Exosome [BR:
ely04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117272232
Exosomal proteins of breast milk
117272232
Cell adhesion molecules [BR:
ely04515
]
Integrins
Integrin alpha subunits
117272232
CD molecules [BR:
ely04090
]
Proteins
117272232
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP
FG-GAP_3
CLIPPER
Motif
Other DBs
NCBI-GeneID:
117272232
NCBI-ProteinID:
XP_033506933
LinkDB
All DBs
Position
12:30060656..30081242
Genome browser
AA seq
1053 aa
AA seq
DB search
MEGMVTRGLWMVVFLLGCGRLSAFNLDPDNVVRKNGDPGSLFGFSLAMHRQLDPIDKRML
LVGAPMAKRLSRQISERPGGLYDCDITSPSPTCNRVDFDNSENPKIESKHNQWMGVTVSS
QGPGGKVLTCAHRYQRRANVNTAIESRDIIGRCTVLSQSLTIDPYSGEEGDSWHFCDQRP
RGHEMFGSCQQGISATFDKNYHYLIFGAPGAYNWKGIVRLEQKNESFLEQGIFDDGPFEV
GDETEKNPDLVPAPPNSYLGFSLDSGNSLTKKGQLTVVAGAPRANHSGAVVLLKTAGETS
RRLVDEYTLEGEGLSSSFGYDLTVLDLNADGWQDIVVGAPQYFEKEGEIGGAVYVFLNKA
GKWNTVKPTKLYGPKDSMFGLAVQNLGDINQDGFDDFAVGAPYDKDGAGAVYIYHGAKTA
TGLKSEKAAQILQGKGLGVEQFGYSLAGNMDLDRNTYPDLAVGSLSDAVFVFRARPVINI
QKEIKFTPNEIDLSNKNCGDNFCLTVEACLTYTARPKSYAPKLTVEYSLEADADYGQRGV
STRATFSDSSGPTSRGTVTISSKGKKQCITRELMIKTDIRDKLHGIPIDVSVNIQDAKRK
RRQSSSELQPVLDANESPKFRSEVNFLKEGCGSDKVCQSNLQVKYRYGYRTTDEDTFTPL
ELEGDVPVISLSNQKDIALEIKVSNLNADDAHEASLTASFPQSVTYAAYRVPANEGPVNC
KANNNGSMANCDLGNPFRANSETTFYIIVSISGISGDTNELEIDLQLETTSVQKIPPVKA
KAKVAVMLQLSISGNAQPSQVYFGGEVKGESAMKTENDIGSPITHQFRIINLGKKMKGSD
TATLNIDWPKVSDQGHWLLYLMKISATGVEQMECTPKSEINPLDKQPTNTRTRRAAGKLL
ERDEGTLSRLLASKNSITLSCGSGAKCVRITCPLRGMDSNAVITINSRLWNSTFLEYYPK
LHHVEVIMGASLHVDSTAQNIVLQNAETQVKLTVFPERRAASYGGGVPWWIIVLSILFGL
MLLALLAFLLWKCGLFDKKNKEHPSEKERLTNA
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atggagggcatggtcacccgtggactgtggatggtcgtctttctcttgggatgtgggcga
ctgtctgcgttcaacctggaccccgacaatgtcgtgcggaagaacggagatccaggcagt
ttattcggcttctctctcgccatgcaccggcagcttgatccgattgataagagaatgctg
ctggttggtgccccgatggcgaaacgcttgagccgtcaaatatctgaaaggccaggagga
ctgtacgactgtgacatcacctcaccctctcctacttgcaacagagttgattttgataac
agtgagaatccaaaaatagaaagcaaacataaccagtggatgggagtgacagtcagcagt
caggggccaggaggaaaggttttgacctgtgcccatcgctaccagcgtcgggccaatgtg
aatacagctattgagtcccgtgatattattggccgctgcaccgtgctgagtcagtccttg
accatagatccctactcgggtgaagagggagatagctggcatttctgcgaccagaggccc
agaggtcacgagatgtttggctcctgccagcagggcatctcggccacatttgacaagaac
taccactacctcatctttggggctcctggagcatacaactggaaaggtattgtacgcttg
gaacaaaagaatgaatccttcctggagcagggcatctttgacgacggtccttttgaggtg
ggagatgagactgaaaagaatcctgatttggtcccggctcctcccaacagctaccttggt
ttctctctggactcagggaatagtctgaccaagaagggccagctgacagtggtggcggga
gctcccagagcgaaccatagcggagcagtggttctgctgaagacagccggcgaaacaagt
cgcagattggtagatgagtacaccctggagggggaagggctgtcctcgtcttttggctac
gatctgactgtgctggatctcaatgcggatggttggcaggacattgtggtgggagcacct
cagtactttgagaaggagggggaaatcggaggagccgtctacgtgtttctcaacaaagct
ggaaagtggaacacagtcaagcccaccaagctatatgggcccaaggattctatgttcggc
ctggctgtgcaaaacctgggagacatcaatcaggatggtttcgatgattttgcagtggga
gctccttatgacaaagatggtgcaggggctgtttacatctaccacggtgcaaaaacagcc
acaggtctcaagtctgaaaaagctgcacagattctgcaaggcaaaggtttaggagtggag
cagtttggctactctttggcaggcaacatggacctggataggaacacctaccctgacctg
gctgttggatccctctctgatgctgtctttgtcttcagagcccgtccagttattaacatt
cagaaggaaatcaagttcacaccgaatgaaattgacctcagcaacaagaactgtggcgac
aacttctgcttgacagttgaggcatgcttaacctacactgcccgccccaagagctacgct
cccaaactgacggtggagtactccctcgaggcggatgctgattacgggcagagaggtgtt
agtaccagggcgaccttctccgattcttctggtcctacctccagagggaccgtcactata
agcagcaaaggaaagaaacagtgcattactcgtgagctcatgataaagacagatattcga
gacaagctgcacgggatccccatcgatgtgtctgtgaacatccaggatgccaagcgtaaa
cgcagacagagctcatctgaactgcaacctgtcctggatgccaatgagtcaccgaaattt
cgctcagaggtgaatttcctgaaggaaggttgcggcagcgacaaagtttgccagagcaat
ctgcaggtgaaatatcgctatggctacaggacaactgatgaagacacgttcactccatta
gagctggagggtgacgtgccagtgatctcgctcagcaaccagaaagacatcgccttggag
atcaaagtgtccaatctaaatgcagatgatgcacatgaagcctctttgaccgcctccttc
ccacagtctgttacctacgccgcttaccgcgttccagctaatgaggggcctgtaaactgt
aaagccaataacaacggttctatggctaactgtgaccttggaaacccgttcagagctaac
tcagagacgaccttctatattattgtgagtatatcaggcatctctggcgacaccaatgag
ttggagattgatcttcagctagaaacgacgagcgttcagaaaatacctcctgttaaagca
aaggcaaaggtggccgtcatgttgcagctgtctatatcaggaaacgcccagccgtctcag
gtctactttggaggagaggtcaaaggtgagtcggccatgaagactgaaaatgacatcggc
agtcccatcacacaccagttcagaataatcaatctgggaaaaaaaatgaaaggctctgac
accgccaccctcaacatcgactggccaaaagtgagtgatcaggggcattggctgctctac
ctgatgaagatcagcgccactggagtggaacagatggagtgcactcctaaatcagagatc
aaccctctggacaagcaaccaactaacacaaggacaagaagagcagcaggaaaactcctg
gaaagagacgagggcacactttcacgtctacttgcctcgaagaattctataactctgtcc
tgtggcagtggggcaaaatgtgtgaggataacatgccccctgcggggcatggacagtaat
gcagtcatcactatcaactctcgcctctggaacagcaccttcttagagtattatccaaag
ctgcatcatgtggaggtgataatgggggcctctctgcatgttgatagcacagcacagaac
atagtgctgcaaaatgctgagacacaggtgaaactgacggtgttcccagagaggcgtgca
gcctcgtatggaggaggagtgccctggtggatcatcgtgctgtctatcctgtttgggctg
atgctgttggccctgttggctttccttctgtggaagtgtggactctttgacaaaaagaat
aaggaacacccatcagaaaaagagagactgacaaatgcataa
DBGET
integrated database retrieval system