KEGG   Epinephelus lanceolatus (giant grouper): 117272232
Entry
117272232         CDS       T07331                                 
Name
(RefSeq) integrin alpha-6-like
  KO
K06485  integrin alpha 6
Organism
ely  Epinephelus lanceolatus (giant grouper)
Pathway
ely04382  Cornified envelope formation
ely04510  Focal adhesion
ely04512  ECM-receptor interaction
ely04514  Cell adhesion molecule (CAM) interaction
ely04518  Integrin signaling
ely04810  Regulation of actin cytoskeleton
ely04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ely00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    117272232
   04514 Cell adhesion molecule (CAM) interaction
    117272232
   04518 Integrin signaling
    117272232
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    117272232
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    117272232
   04810 Regulation of actin cytoskeleton
    117272232
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    117272232
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ely04147]
    117272232
   04515 Cell adhesion molecules [BR:ely04515]
    117272232
   04090 CD molecules [BR:ely04090]
    117272232
Exosome [BR:ely04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117272232
  Exosomal proteins of breast milk
   117272232
Cell adhesion molecules [BR:ely04515]
 Integrins
  Integrin alpha subunits
   117272232
CD molecules [BR:ely04090]
 Proteins
  117272232
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_1 Integrin_A_Ig_2 FG-GAP FG-GAP_3 CLIPPER
Other DBs
NCBI-GeneID: 117272232
NCBI-ProteinID: XP_033506933
LinkDB
Position
12:30060656..30081242
AA seq 1053 aa
MEGMVTRGLWMVVFLLGCGRLSAFNLDPDNVVRKNGDPGSLFGFSLAMHRQLDPIDKRML
LVGAPMAKRLSRQISERPGGLYDCDITSPSPTCNRVDFDNSENPKIESKHNQWMGVTVSS
QGPGGKVLTCAHRYQRRANVNTAIESRDIIGRCTVLSQSLTIDPYSGEEGDSWHFCDQRP
RGHEMFGSCQQGISATFDKNYHYLIFGAPGAYNWKGIVRLEQKNESFLEQGIFDDGPFEV
GDETEKNPDLVPAPPNSYLGFSLDSGNSLTKKGQLTVVAGAPRANHSGAVVLLKTAGETS
RRLVDEYTLEGEGLSSSFGYDLTVLDLNADGWQDIVVGAPQYFEKEGEIGGAVYVFLNKA
GKWNTVKPTKLYGPKDSMFGLAVQNLGDINQDGFDDFAVGAPYDKDGAGAVYIYHGAKTA
TGLKSEKAAQILQGKGLGVEQFGYSLAGNMDLDRNTYPDLAVGSLSDAVFVFRARPVINI
QKEIKFTPNEIDLSNKNCGDNFCLTVEACLTYTARPKSYAPKLTVEYSLEADADYGQRGV
STRATFSDSSGPTSRGTVTISSKGKKQCITRELMIKTDIRDKLHGIPIDVSVNIQDAKRK
RRQSSSELQPVLDANESPKFRSEVNFLKEGCGSDKVCQSNLQVKYRYGYRTTDEDTFTPL
ELEGDVPVISLSNQKDIALEIKVSNLNADDAHEASLTASFPQSVTYAAYRVPANEGPVNC
KANNNGSMANCDLGNPFRANSETTFYIIVSISGISGDTNELEIDLQLETTSVQKIPPVKA
KAKVAVMLQLSISGNAQPSQVYFGGEVKGESAMKTENDIGSPITHQFRIINLGKKMKGSD
TATLNIDWPKVSDQGHWLLYLMKISATGVEQMECTPKSEINPLDKQPTNTRTRRAAGKLL
ERDEGTLSRLLASKNSITLSCGSGAKCVRITCPLRGMDSNAVITINSRLWNSTFLEYYPK
LHHVEVIMGASLHVDSTAQNIVLQNAETQVKLTVFPERRAASYGGGVPWWIIVLSILFGL
MLLALLAFLLWKCGLFDKKNKEHPSEKERLTNA
NT seq 3162 nt   +upstreamnt  +downstreamnt
atggagggcatggtcacccgtggactgtggatggtcgtctttctcttgggatgtgggcga
ctgtctgcgttcaacctggaccccgacaatgtcgtgcggaagaacggagatccaggcagt
ttattcggcttctctctcgccatgcaccggcagcttgatccgattgataagagaatgctg
ctggttggtgccccgatggcgaaacgcttgagccgtcaaatatctgaaaggccaggagga
ctgtacgactgtgacatcacctcaccctctcctacttgcaacagagttgattttgataac
agtgagaatccaaaaatagaaagcaaacataaccagtggatgggagtgacagtcagcagt
caggggccaggaggaaaggttttgacctgtgcccatcgctaccagcgtcgggccaatgtg
aatacagctattgagtcccgtgatattattggccgctgcaccgtgctgagtcagtccttg
accatagatccctactcgggtgaagagggagatagctggcatttctgcgaccagaggccc
agaggtcacgagatgtttggctcctgccagcagggcatctcggccacatttgacaagaac
taccactacctcatctttggggctcctggagcatacaactggaaaggtattgtacgcttg
gaacaaaagaatgaatccttcctggagcagggcatctttgacgacggtccttttgaggtg
ggagatgagactgaaaagaatcctgatttggtcccggctcctcccaacagctaccttggt
ttctctctggactcagggaatagtctgaccaagaagggccagctgacagtggtggcggga
gctcccagagcgaaccatagcggagcagtggttctgctgaagacagccggcgaaacaagt
cgcagattggtagatgagtacaccctggagggggaagggctgtcctcgtcttttggctac
gatctgactgtgctggatctcaatgcggatggttggcaggacattgtggtgggagcacct
cagtactttgagaaggagggggaaatcggaggagccgtctacgtgtttctcaacaaagct
ggaaagtggaacacagtcaagcccaccaagctatatgggcccaaggattctatgttcggc
ctggctgtgcaaaacctgggagacatcaatcaggatggtttcgatgattttgcagtggga
gctccttatgacaaagatggtgcaggggctgtttacatctaccacggtgcaaaaacagcc
acaggtctcaagtctgaaaaagctgcacagattctgcaaggcaaaggtttaggagtggag
cagtttggctactctttggcaggcaacatggacctggataggaacacctaccctgacctg
gctgttggatccctctctgatgctgtctttgtcttcagagcccgtccagttattaacatt
cagaaggaaatcaagttcacaccgaatgaaattgacctcagcaacaagaactgtggcgac
aacttctgcttgacagttgaggcatgcttaacctacactgcccgccccaagagctacgct
cccaaactgacggtggagtactccctcgaggcggatgctgattacgggcagagaggtgtt
agtaccagggcgaccttctccgattcttctggtcctacctccagagggaccgtcactata
agcagcaaaggaaagaaacagtgcattactcgtgagctcatgataaagacagatattcga
gacaagctgcacgggatccccatcgatgtgtctgtgaacatccaggatgccaagcgtaaa
cgcagacagagctcatctgaactgcaacctgtcctggatgccaatgagtcaccgaaattt
cgctcagaggtgaatttcctgaaggaaggttgcggcagcgacaaagtttgccagagcaat
ctgcaggtgaaatatcgctatggctacaggacaactgatgaagacacgttcactccatta
gagctggagggtgacgtgccagtgatctcgctcagcaaccagaaagacatcgccttggag
atcaaagtgtccaatctaaatgcagatgatgcacatgaagcctctttgaccgcctccttc
ccacagtctgttacctacgccgcttaccgcgttccagctaatgaggggcctgtaaactgt
aaagccaataacaacggttctatggctaactgtgaccttggaaacccgttcagagctaac
tcagagacgaccttctatattattgtgagtatatcaggcatctctggcgacaccaatgag
ttggagattgatcttcagctagaaacgacgagcgttcagaaaatacctcctgttaaagca
aaggcaaaggtggccgtcatgttgcagctgtctatatcaggaaacgcccagccgtctcag
gtctactttggaggagaggtcaaaggtgagtcggccatgaagactgaaaatgacatcggc
agtcccatcacacaccagttcagaataatcaatctgggaaaaaaaatgaaaggctctgac
accgccaccctcaacatcgactggccaaaagtgagtgatcaggggcattggctgctctac
ctgatgaagatcagcgccactggagtggaacagatggagtgcactcctaaatcagagatc
aaccctctggacaagcaaccaactaacacaaggacaagaagagcagcaggaaaactcctg
gaaagagacgagggcacactttcacgtctacttgcctcgaagaattctataactctgtcc
tgtggcagtggggcaaaatgtgtgaggataacatgccccctgcggggcatggacagtaat
gcagtcatcactatcaactctcgcctctggaacagcaccttcttagagtattatccaaag
ctgcatcatgtggaggtgataatgggggcctctctgcatgttgatagcacagcacagaac
atagtgctgcaaaatgctgagacacaggtgaaactgacggtgttcccagagaggcgtgca
gcctcgtatggaggaggagtgccctggtggatcatcgtgctgtctatcctgtttgggctg
atgctgttggccctgttggctttccttctgtggaagtgtggactctttgacaaaaagaat
aaggaacacccatcagaaaaagagagactgacaaatgcataa

DBGET integrated database retrieval system