Epinephelus lanceolatus (giant grouper): 117272266
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Entry
117272266 CDS
T07331
Symbol
fubp1
Name
(RefSeq) far upstream element-binding protein 1 isoform X1
KO
K13210
far upstream element-binding protein
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ely03019
]
117272266 (fubp1)
03041 Spliceosome [BR:
ely03041
]
117272266 (fubp1)
Messenger RNA biogenesis [BR:
ely03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
117272266 (fubp1)
Spliceosome [BR:
ely03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
117272266 (fubp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_KhpA-B
Secretin_N
Motif
Other DBs
NCBI-GeneID:
117272266
NCBI-ProteinID:
XP_033506981
LinkDB
All DBs
Position
19:complement(27114591..27126076)
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AA seq
669 aa
AA seq
DB search
MADYSSVAPPSSNAGGGMNDAFKDALQRARQIAAKIGGDGVAAPPSNEFGYGGQKRPLED
AGGYFPMPNLNIDQPETKKVATNDAFSGMGGMGGPPRSISEEFKVPDGMVGFIIGRGGEQ
ISRLQQESGCKIQIAPDSGGMPDRSVTLTGGPESIQAAKRLLTEIVEKGRPAPAFNHNDG
PGMTVQEIMVPASKAGLVIGKGGETIKSLQERAGVKMVMIQDGPQNTGADKPLRISGEPF
KVQQAKEMVMELIRDQGFREQRGEYGSRVGGGGGGGDSLDVPVPRFAVGIVIGRNGEMIK
KIQNDTGVRIQFKPDDGSTPDRIAQIMGPPDQAQHAAEIISDLLRSVQAGGPPGHGGGRG
RGRGQGNWNMGPPGGLQEFTFTVPTMKTGLIIGKGGETIKGISQQSGARIELQRNPPPNA
DPNIKMFTVRGSPQQIDYARQLVEEKIGGPVTPMGGPHGPPGPHGGPGPHGPPGPPGPPG
APMGPYNPGPYNQGPPGPHGPPAPYQPQGWGNGYPHWQQGQPDPNKAAADANAAAWAAYY
AQYSQQPQAPMTPTSGAPGTTQTNGQGDPQAAGQSGQADYSKAWEEYYKKMGQQSQQPQD
YTKAWEEYYKKQGQAAPQATAAAAASQPGGQPDYSAAWAEYYRQQAAYYGTGNPQTMGAA
PQAPQVHPR
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggctgactacagcagcgtggctcccccgtcctctaacgccggtggcggaatgaacgac
gcttttaaagacgctttacagcgagcaagacagatcgcagcgaagatcggtggcgatggc
gttgcggcacccccatcaaacgaatttggctacgggggccagaaaaggcccctggaggac
gctggtgggtattttcccatgcctaacctgaatatcgaccaaccagagacgaagaaagtg
gcaactaatgatgccttttcaggaatgggaggaatgggtggccccccaaggtcaatttca
gaggaattcaaggttccagatggaatggttggattcattattggaagaggaggtgaacag
atatctcgcctgcagcaagagtctggatgtaaaatacagattgcacctgacagtggagga
atgcctgacaggtcggtgacattaacaggagggccagaatccatccaggctgcaaagagg
ttactaacagaaatagttgagaaggggcgtccggctccagcattcaaccacaatgatggc
ccgggaatgactgtccaggagattatggtccctgcctcaaaagccggactcgtcattggc
aagggaggagaaaccatcaaaagccttcaggaaagagctggagtgaagatggtcatgatc
caagacggaccccaaaacacaggtgcagacaagccactccgtatttccggagaacctttt
aaagttcagcaagccaaagagatggtgatggagctgatcagagatcaaggcttcagggag
cagaggggcgaatatggttcaagagttggaggaggcggtggaggaggagacagcttagat
gttcccgtccctcggtttgcagtgggaattgttattggcagaaatggagagatgatcaag
aaaatacagaatgacactggtgtccggattcagtttaaaccagatgacggcagcacacca
gacaggatagcacagatcatgggcccccctgaccaggctcagcatgcggcagaaattatc
tctgatcttctgaggagcgtccaggccggtgggcctccaggacatggcggtggaagaggt
cgtggtcgtgggcaggggaactggaacatgggcccccctggtggcctgcaggagtttacc
ttcactgtcccaaccatgaagactggcctcatcattggaaaaggtggtgagacaatcaag
ggcatcagccagcaatctggagccagaatcgagctgcagaggaaccctccacccaacgca
gatcccaacatcaaaatgttcacagttcggggctctcctcagcagatcgactatgcccgg
cagctggtagaggagaaaattgggggacccgtcactccaatgggtggcccgcacggtccc
cctggtccacatggagggccaggcccacatggtcctcctggaccaccgggaccccctggt
gctcccatgggtccatacaaccctggaccatacaaccagggacctccaggaccacacggt
ccaccagcgccttaccagcctcagggatggggcaacggctacccacactggcaacaagga
caacctgatccaaataaagcagcagctgatgccaacgcagcagcgtgggcagcctactac
gctcagtacagccagcagccacaggctcccatgaccccgacaagtggggctccaggcacg
actcaaaccaacggccaaggtgacccacaggctgcaggtcagagtggacaggcagattac
tccaaggcctgggaggaatattacaagaaaatgggtcaacagagtcaacaacctcaggac
tacacaaaagcatgggaggagtattacaagaaacaaggtcaagcggcccctcaggccaca
gcagcagcagcagcctctcagccaggaggccagccagattacagcgctgcctgggctgag
tactaccgtcagcaggctgcctattacggcacaggcaaccctcagacgatgggtgcagca
ccacaagcccctcaggtacacccccgataa
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