Epinephelus lanceolatus (giant grouper): 117272330
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Entry
117272330 CDS
T07331
Name
(RefSeq) retinal-specific phospholipid-transporting ATPase ABCA4-like isoform X1
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117272330
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ely02000
]
117272330
Transporters [BR:
ely02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
117272330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
Motif
Other DBs
NCBI-GeneID:
117272330
NCBI-ProteinID:
XP_033507086
LinkDB
All DBs
Position
19:21853014..21913308
Genome browser
AA seq
2323 aa
AA seq
DB search
MKTGSQIRLLLWKNWTLRKRQKVRFLVEICWPMLLFIGLVWLRKANPLYQQHECHFPNKA
MPSAGILPWIQGMFCNVNNPCFRYPTRGESPGVVSNYNNSVLARFYVDVQELLLNETEVQ
QLGHLWHDVSSFSNFMETLRNNPSVVSGRGLKIDDILKDDEVLTAFLLRDAGLSESIVYQ
LINAEIRLEQFAFGIPDLQLKDIACSQALLERFIIFPSRMGLHGVRNAMCALSQQRLQRI
EDVLYANLDFFKIFKVMPQVMDSSSQGIDLQLWGRVLKAMSEKIQLLMERESSQELLKEV
TSLFQAGGPSSFTQLMSSVSSLFCGYPEGGGSRVLSFNWYEDNNYKVFLGVNGTKNYNYA
YDDSTTPSCNALMQTLESNPVTKIVWNSVKPLLMGKILYTPDSPAVHKILKSANTTFEQL
ERLQNMAKAWEEVGPQLWAFFNNSVQMNMMRDTLRNPTVTHFMDNSLQDTDINTKHILNF
LHNGPEEQREAGMPNFDWRNIFNIADQIIRTFNKYGECIKLDKFVAYTDESQMNHQALYL
LEENKFWAGVVFMDMYPWTNSVPPHVKYKIRMDIDAVERTNKIKDRYWDPGPRADPMEDQ
RYIWGGFAYLQDMIEHGIIKIHTGKDWPLGVYVQQMPYPCYVDDLFMITLNRCFPMFMVL
AWIYSVSMTVKSIVLEKELRLKETLKAMGVDNGVIWYTCFIDSLVMMTASTALLTSIIMG
GKVLNYSDPILVFFFLLTFTVATIMQCFLMSVFFNKANLAAACSGIIYFTLYLPHILCFA
WQDRITKNIKLAASLLSPVAFGFGTEYLSRYEEQGLGLQWDNIMTSPLEKDTYSFLMSIL
MMVFDAVLYAVLAWYLDNIFPGQYGIGRPFYFPFQPSYWQTPAHSHSLTEMPDQAPEKPE
PDNMEKDVESRGSPETYICNGSASRKTCKHQRKRDQLERERELLRRQEETPNQEECHDSG
ENGQLFFEPDPVGLVMGVQIQDLVKVFDGRSRPAVNCLSINFYESQITSFLGHNGAGKTT
TMSILTGLYPPTSGTAYINGKDIRTDIDTIRSSLGMCPQYNILFKHLTVEEHILFYSLLK
GRTQEEAEMEVEDMLLDLGLPHKRDEEAQNLSGGMQRKLSVAMAFVGGSKVVILDEPTSG
VDPYSRRSIWDLLLKYRTGRTVILSTHHMDEADLLSDRIAIISKGQLHCCGSPLFLKNCF
GVGFYLTLVRRMKDLKKRENDCDCASDCSCSCSICTRYKDQSQNQFQHLDRVLDGDIESI
TSLIHHHVPEAKLIETIGQELTYLLPNKGFKHRAYASLFRELEEMLTDIGLSSFGISDTS
LEEIFIKVTADGEAANNATTPEQWMLQRRKNNSKGGVEGDEEHNGMQSNGITHGASDSSA
GKGSRQVKGATLILKQFHALLVKRFHHAIRSQKDFLAQIVLPASFVLIALIFTMIVPPFG
EYPSLTLTPWMYGQQFTFFSNEQPFDPKMKRFTERLLNRPGLGTRCMEGEPLGMPCSNTT
AEWELPDVSPVASNILQSPEWNPRNPSPSCQCSTSKKLTMMPICPIGAGGLPPRQRLEAT
GDTMLDLTDRNISDYLVKTYPSLIRTSLKSKYWVNEQRYGGLSVGGQLPILDVNPRDIQN
VFHQLGRMLNITAGYYSGLALREIGPFLRYMESEFNIKVWYNNKGWHAMVAFMNVANNAI
LRAFLPPSAKPVEFGMTAINHPLNLTKEQLSEVTVLTTSVDAVVAICVIFAMSFIPASFV
LYLIQERVTKAKHLQFVSGVSPLVYWVANFFWDMVNYSISTAMVVGIFMAFDKKCYTSPS
NLPALIALLLLYGWSVTPMMYPMSYVFSIPSTAYVSLSCINLFIGINTSAVTFILELFEN
NRPLLMFNEWLKKGLLVLPHFCLGRGLIDMAMNQAVTDVYARFGEEYTQDPFRWDFVGKN
IAFMAVEGFVYFILNLLIQYRFFLDHWLSDYKQTSLQDEDDDVAAERQRIYDGGSKTDIL
QIRDLSKTYVGRKRAAVDRICVGVSAGECFGLLGVNGAGKTTTFKMLTGDTDVSSGEATV
AGYSILTEILDVHQNMGYCPQFDAIDELLTGREHLYLYARLRGVPESEIPRVAEWGIQKL
GLAEYAGRCAGTYSGGNKRKLSTAIAMIGCPALVLLDEPTTGMDPHSRRFLWNAIMSVIQ
DGRAVVLTSHSMEECEALCTRLAIMVNGTFKCLGTIQHLKYKFGEGYIVTMKIKAAKAGL
SPDLEPVVSFIESSFPGCVQREKHYNTLQYEIASSSLARIFQLVVANKERLSIEDYSVSQ
TTLDQVFVNFAKQQTGEDEEVTFHRRTAGGRKDIKISPAQRKT
NT seq
6972 nt
NT seq
+upstream
nt +downstream
nt
atgaagacaggctctcaaatccgcctgttactgtggaagaactggaccctccgcaagaga
cagaaggtccgcttcctggttgagatatgctggcccatgttgttattcattggtctggtt
tggctgaggaaggctaatccactgtaccaacaacatgaatgtcatttccccaacaaggcc
atgccttcagcagggattctgccctggatccagggcatgttctgcaacgtcaacaacccc
tgcttcagatatccaaccagaggagagtctccaggcgttgtctccaactataacaactca
gtattggcacggttctatgttgatgtccaggagcttctgctcaatgagacggaggtccag
cagctcggccatctttggcacgatgtatcgtccttctcaaacttcatggaaacattacgc
aacaacccatctgtggtgtcaggccgtgggctgaagatagatgatattctgaaggatgat
gaggttctcacggccttccttttgcgagatgccggcctctcagagtccatagtctaccag
ctcatcaatgcagagatacgactagaacagtttgcctttggcataccagacctgcagctg
aaagacatcgcttgcagccaggccctgctggagcgcttcatcatcttccccagtcgcatg
ggtctacacggggtccgcaacgccatgtgtgccctcagtcagcagaggctgcagaggata
gaggacgtcctctatgccaatctggacttctttaaaatcttcaaagtgatgcctcaggtt
atggacagcagctcccaggggattgacctgcaactctggggtcgggttcttaaggcgatg
tcagaaaagattcaacttctgatggagcgggagagctctcaggagctcctgaaggaggtt
acctctttgtttcaagccgggggtccgtcctcgttcacacagctgatgtccagtgtgtcc
agcctcttctgtggatacccagagggtggcggctccagggtcctgtccttcaactggtat
gaggacaacaactacaaagtgtttctgggggtcaatggcaccaagaactacaactatgct
tatgatgactctaccactccctcctgcaatgccctgatgcagaccctggagtccaaccct
gtcacaaaaattgtgtggaattcagtcaagcccctgctgatgggaaagatcctgtacacc
cccgactcccctgccgtccacaagatattaaagagtgccaataccacattcgaacagtta
gagaggctgcagaacatggccaaggcctgggaggaggtgggacctcagctctgggctttc
ttcaacaacagtgtgcagatgaacatgatgagggacaccctgagaaacccgacagtgacg
cacttcatggacaacagtctgcaagacactgacattaacaccaaacacattcttaacttc
cttcacaatggtccagaggagcagagggaggcgggcatgcccaactttgattggaggaac
atttttaacatcgccgaccagatcatacgcacgttcaacaagtatggagagtgcatcaag
ctggataaatttgtggcttacaccgacgagtcccagatgaaccatcaggccttgtacctg
ctggaggagaacaagttttgggccggcgtggtttttatggacatgtatccctggaccaac
agtgtacccccgcatgtcaagtacaagatccgcatggacatcgatgcagtggagcgcacc
aacaagatcaaagacaggtactgggaccccggccccagagcagaccctatggaggaccag
aggtacatctggggcggctttgcctacctgcaagacatgattgaacatggaatcatcaag
attcacacaggcaaagactggccactcggggtctacgtgcagcagatgccatatccgtgc
tatgtggatgacctctttatgatcacactgaaccgctgcttccccatgttcatggtgctg
gcctggatctactctgtgtccatgactgtgaagagcatcgtgctggagaaggagctgcgc
ctcaaggagactctcaaagccatgggggtcgacaacggagtcatttggtacacatgcttc
atcgacagcttagtcatgatgactgcaagcacagcgctgctcacctccatcatcatgggt
ggaaaggtgctgaattacagcgaccccatcctcgtcttctttttcctgctgacattcacc
gtcgccaccatcatgcagtgtttcctcatgagtgtgttcttcaacaaggccaacctggca
gccgcctgcagtggcatcatctacttcaccctctatctgccacatatcctctgctttgcc
tggcaggaccgcatcaccaagaacatcaagttggctgctagcttgttgtctccagtggcc
tttggcttcgggacagagtacctgtcacggtatgaggagcagggtctgggtctgcagtgg
gacaacatcatgaccagcccattagagaaagacacctactccttcctcatgtccatcctc
atgatggtgtttgacgctgtcctgtatgctgtcctggcctggtatctggataatatcttc
ccaggacagtatggcattggtagaccattctacttcccgttccagccctcatactggcaa
acacctgcacattcacactcactcacagaaatgccagatcaagctcctgagaaacctgaa
ccagacaacatggagaaggacgttgagagcaggggctcaccggagacatacatctgtaac
ggctcagccagcaggaaaacctgtaagcaccaacgtaagagggatcagctggagagagag
agagagctgctgagacgacaagaggaaactccaaaccaggaggagtgtcatgactcaggg
gaaaatggtcagttgttcttcgagcctgacccagtgggcctggtgatgggggtgcagatc
caggacctggtgaaagtgtttgatggaagatctcgtccagctgtgaactgtctcagcatc
aatttctatgaaagccagatcacatccttcctggggcacaatggggctggaaaaaccacc
actatgtccatcctgactggcctgtaccctcctacatctggcacagcctacattaatgga
aaagatatcaggactgacatagacaccatccgctcctccctggggatgtgccctcaatac
aacatcctcttcaaacacctcacagtagaggagcacatcctattctactcactgctgaaa
ggtcgcacacaggaggaggcggagatggaggttgaggacatgctgctggacctcgggctg
cctcacaagagagacgaggaggcccagaacctctcaggtggtatgcagaggaaactgtca
gtcgccatggcgtttgttggagggtcaaaggtcgtgattctggacgaacccacctcggga
gtggacccttattctaggcgatccatttgggacctcctactgaaatacagaactggccgg
acggtgatcctgtccactcatcacatggacgaggccgacctgctgagtgaccgcatcgcc
atcatttccaaaggacaactccactgttgcggatcccccctcttcctcaagaactgcttt
ggagtcggcttctatttaacacttgttcgccggatgaaggatctcaagaagagggagaat
gattgcgactgtgcctcagactgctcctgttcctgctccatctgtactagatacaaagat
cagtctcagaaccagttccagcatctagacagagttctggatggggatatagagagcatc
actagcctcatccaccaccacgtccctgaagccaagctgatcgaaacaataggccaggag
ctgacctacctactccccaataagggcttcaaacatcgagcatatgccagcctgttcagg
gagctggaggagatgcttactgacattggcctcagtagctttggcatctctgatacatca
ctggaggagatcttcataaaggtcactgcagatggagaagctgcgaataatgccaccact
cctgagcagtggatgttacagcggagaaaaaacaacagtaaaggaggtgtagagggagat
gaagaacataatggaatgcagtctaacggcattacccatggtgcatcggacagcagtgca
ggaaagggctccaggcaggtgaaaggggccactctgatcctgaagcagttccatgctctg
ttagtgaagaggttccaccacgccataagaagccagaaagacttcctggcacagatcgtc
cttcctgccagttttgtcctaatagctctgatcttcactatgatcgtccctccgttcgga
gagtatcccagtctgactctgaccccctggatgtatggacaacagttcaccttcttcagt
aacgagcaaccgtttgaccccaaaatgaaacgtttcacagagcgcttactgaacagacca
ggcctgggaacacgctgcatggaaggagaaccgctaggaatgccctgcagtaacaccaca
gcagagtgggagcttcctgacgtctctcccgtggccagcaacatcttacagagtccagag
tggaacccgagaaacccgtctccttcctgccagtgcagcaccagtaagaagctcaccatg
atgcccatctgtcccattggagcgggaggcctgccccctcgccaacgactcgaggcaacg
ggagacacaatgctggacctgacagacaggaacatctctgactacctggttaaaacctac
cccagtctcatcaggaccagtttgaagagcaaatattgggtgaatgagcaaagatatgga
ggtctgtcagtcggaggacagcttcccatcctggacgttaaccccagagacatccagaat
gttttccatcagctgggacgcatgctcaacatcacagcgggttactactctggactcgca
ctgcgggagattggtcctttcttacgatacatggaaagtgaattcaatataaaggtatgg
tataataacaaaggctggcatgccatggtggccttcatgaacgtggccaataacgctatc
ctgcgggccttcctacctccatctgccaaacctgttgagtttggcatgaccgccatcaac
caccctctgaacctcaccaaagagcagctttccgaagtcacagtgttaaccacctcagtt
gacgccgtagtggcgatctgtgttattttcgccatgtccttcatccctgccagctttgtc
ctctacctcatccaggagcgtgtgaccaaggccaagcacctgcagtttgtcagtggggtc
agccctttggtttactgggtggccaacttcttctgggacatggttaactactctatcagc
actgcaatggtggttggcatttttatggcttttgacaagaagtgttacacatcaccatcc
aacctgccggcactaatagctctgctcctgctgtatgggtggtcagtgacgcccatgatg
taccccatgtcctacgtattcagcatcccaagcactgcgtatgtgtcgctgtcctgcatc
aacctgttcataggcatcaacaccagtgctgtcaccttcatcctggagctgttcgaaaac
aacaggcctttgctgatgttcaacgagtggctaaagaaagggttgctggtgctccctcac
ttctgcctggggcgaggactgatagacatggccatgaaccaggctgttactgatgtctat
gccagatttggtgaagagtacacacaggaccctttccgctgggactttgtggggaaaaat
atcgctttcatggcagtagaaggctttgtctactttattctcaatcttctgatccagtac
cgcttcttcttagaccactggttatcagactacaagcagacttcattacaagatgaggac
gacgatgtggcagcagagaggcagagaatttatgacggagggagcaagacagacatcctg
cagatcagagacctttctaagacgtatgtgggcaggaagagggcagctgtggaccggatt
tgtgtgggtgtctctgcaggagagtgctttggtcttttgggagttaatggagccggaaag
acgacgaccttcaaaatgctgactggtgacactgatgtcagctccggggaggctactgtg
gccggttacagcatcctgacagagatcctggacgtgcaccagaacatgggctactgtcct
cagtttgacgccatcgatgagctcctaaccggcagggagcatctgtacctctacgctcgt
ctcagaggggtacctgagtcggagatccccagagtggccgagtggggcatccagaagctg
ggtctggcagagtacgccggccgctgtgcagggacctacagtggaggcaacaagcgcaaa
ctctccacagctatcgcaatgattggctgcccggcactggtgctgctggacgagcccaca
acagggatggacccgcactctcgacgcttcctgtggaatgccattatgagtgtcatccag
gacggcagggccgtggtgctaacatcacacagtatggaggagtgtgaggccctctgcact
cgactagccatcatggtcaatgggaccttcaagtgtctgggtaccatccagcatctcaaa
tacaaatttggtgaaggctacatagtgaccatgaaaatcaaggcagctaaagcgggcttg
tccccagatcttgagcctgtcgtgagcttcatagagagcagcttccctggctgcgttcag
agggagaagcactacaacacgctgcagtacgagatcgcctcctcctccctggccaggata
tttcagctggtggtggcaaataaagaaaggctcagcattgaagactactctgtttcccag
acaacactggaccaggtgtttgtcaactttgccaagcaacagacaggagaggacgaggaa
gttacgtttcacagacgaacagcaggtggaagaaaagacatcaagatctcgccagcgcag
aggaagacatga
DBGET
integrated database retrieval system
