Epinephelus lanceolatus (giant grouper): 117272472 Help Entry 117272472         CDS       T07331                                  Symbol cop1 Name (RefSeq) E3 ubiquitin-protein ligase COP1   KO K10143   E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27] Organism ely  Epinephelus lanceolatus (giant grouper) Pathway ely04115   p53 signaling pathway ely04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:ely00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     117272472 (cop1)  09140 Cellular Processes   09143 Cell growth and death    04115 p53 signaling pathway     117272472 (cop1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:ely04121]     117272472 (cop1) Enzymes [BR:ely01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      117272472 (cop1) Ubiquitin system [BR:ely04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     117272472 (cop1)   Multi subunit type E3    Cul4 complex     Target recognizing subunit (DCAF)      117272472 (cop1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_EIPR1 Beta-prop_RIG_2nd zf-C3HC4_2 EIF3I Beta-prop_TEP1_C Beta-prop_WDR19_1st zf-C3HC4 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd zf-RING_2 Beta-prop_EML Beta-prop_DCAF4 zf-RING_UBOX zf-C3HC4_4 Beta-prop_WDR90_POC16_2nd zf-C3HC4_3 zf-RING_5 RING_XB3-XBAT31 WD40_RFWD3 Beta-prop_WDR35_TULP_N WD40_like Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_DCAF12 Beta-prop_IFT122_1st Beta-prop_NUP159_NUP214 zf-rbx1 zf-RING_10 WDR90_beta-prop_4th UvrD-helicase zf_C2H2_10 Motif Other DBs NCBI-GeneID:  117272472 NCBI-ProteinID:  XP_033507306 LinkDB All DBs Position 19:complement(33691868..33714064) Genome browser AA seq 711 aa AA seqDB search MMSSNRPQQSAGGASSVPSTSSSSSSTGGTGNTNGGGGSNAVTSNGNSSGNVVPSRTASE GGLSVPSLAAVPSSRSGFASLSRPSASSGSRKKSLHQAPLYNGLLNSYEDKSNDFVCPIC FEMIEEAHMTKCGHSFCFKCIRQSLEDSNRCPKCNYIVDNVDQLYPNFLVNELILKQKQR SEEKRLKLDHPNGSRWQVFQDVLSPDQENLDLANVNLMLELLVQKKKQLEAESQAAQRQI LMEFLKEARRNKREQLEQLQKELNFLEDDIKRVEEMSGLYCPMMEAECTVPNVEAPSPAP SCSSIIEPPDYSQPPGFGGTTQGKRQTWYNSTLASRRKRLTAHFEDLEQCYFSNKMSRIT DEGRNLNQLDDFMECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAG VTKKIKVFEYGTVIQDAVDIHYPVNEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDG FTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEAKANVCC VKFSPTSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVNGEEIVSASTDS QLKLWNVNKPHCLRSFKGHINEKNFVGLASNGDYVACGSENNSLYLYYKGLSKTLLTFKF DTVKSVLDKDKKEDDTNEFVSAVCWRALPDGESNVLIAANSQGTIKVLELV NT seq 2136 nt NT seq  +upstreamnt  +downstreamnt atgatgtcaagcaaccggccacagcaaagcgccggcggggcgagttcagtgcccagcaca agtagcagcagcagcagcacaggaggcactgggaacaccaacggtggcggtgggagcaac gccgtcacaagtaatggtaacagttctggaaatgttgtgccctcccggacagccagcgag ggcggcttgtcggtgccaagtttggccgccgtgccgtcgtcccggagcgggtttgcctct ctgagcagaccctctgcgtcctcaggcagcagaaagaaatccctccatcaagcacccctt tacaacggcctcttaaattcatacgaagataaaagcaacgactttgtctgcccaatttgc ttcgaaatgatcgaagaggcacacatgacaaagtgtgggcacagtttttgtttcaagtgc atccgacagagtttggaggacagcaacagatgtccaaagtgtaactatattgtcgataat gtggatcagctttacccaaattttcttgtaaatgaactgatcctgaaacagaaacaaagg tcggaggaaaagagactaaaattggatcatcctaatgggtctaggtggcaggtgttccag gacgtgttgagtcctgaccaggagaacttggacctggcaaatgtcaatctgatgctggag cttctggtccagaagaagaagcagctggaagcggaatcccaggcagctcagagacagatc ctcatggagttccttaaagaggccaggagaaacaagagagagcaactagagcaactacag aaagagctcaactttcttgaagatgacattaagcgtgtcgaggaaatgagcggcctgtac tgtccaatgatggaggcagagtgcacggtgcctaatgttgaagctccctcaccagcgccc agctgcagtagtattattgagccaccagactacagccagcctccaggatttggtggaaca acccagggtaaaagacagacctggtacaacagcactcttgcgtcgaggaggaagaggctg acagctcattttgaggacctggaacagtgctacttctccaacaaaatgtcacgtatcaca gatgaaggcaggaatctgaaccagctggatgattttatggagtgtctgtctaagtttaca cgctacaactctgtgcggccgctcgccaccctctcgtatgccagtgacctgtataacggc tccagtattgtctccagtattgagtttgaccgagactgtgactactttgccatcgccggt gtgacaaagaagatcaaggtgtttgagtatggcacagtgatccaggatgctgtggacatc cactaccctgttaatgagatgacctgcaattccaaaatcagctgtatcagctggagcagc tatcataaaaaccttctggctagcagcgactatgagggcactgtcatactgtgggatgga ttcaccggccagaggtccaaagtctaccaggaacacgaaaaaaggtgttggagcgttgac ttcaacctgatggaccctaagctgttagcctctggttctgatgatgctaaagttaagtta tggtcaaccaatcttgacaactctgtcgccagcatcgaggctaaggctaatgtctgctgt gtgaaattcagtcccacctccaggtatcatctggccttcggctgtgcagaccactgtgtc cactactatgatctacggaacactaagcagccaatcatggtgttcaaaggccacaggaag gctgtgtcctacgccaagtttgtcaacggagaagaaattgtttctgcctcaacggacagt cagttgaagctgtggaacgtcaacaaacctcactgtctgcgctccttcaaaggtcatatc aatgagaagaactttgtaggcctggcttccaatggagactatgttgcctgtggcagtgaa aacaactccctgtacctgtactacaaaggactttccaagacactgttaacgttcaagttt gacacagtgaagagtgtcctggacaaggacaagaaggaggacgacaccaatgagtttgtc agtgcggtctgctggagagccctgcctgatggagagtcaaatgtactgattgctgcgaac agtcaaggaacaatcaaggtacttgagcttgtctga

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