Epinephelus lanceolatus (giant grouper): 117272522
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Entry
117272522 CDS
T07331
Symbol
copb2
Name
(RefSeq) coatomer subunit beta' isoform X1
KO
K17302
coatomer subunit beta'
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ely04131
]
117272522 (copb2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ely04147
]
117272522 (copb2)
Membrane trafficking [BR:
ely04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
117272522 (copb2)
Exosome [BR:
ely04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
117272522 (copb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR75_1st
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_HPS5
PEP5_VPS11_N
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_LRRK2
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
117272522
NCBI-ProteinID:
XP_033507380
LinkDB
All DBs
Position
19:complement(11852247..11859251)
Genome browser
AA seq
939 aa
AA seq
DB search
MPLRLDIKRRLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RASKFVARKNWVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDD
MLIKLWDWEKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRQVKIWDYQNKTCVQTLEGHAQNVSCVSFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVCGLRGSNNVALGYDEGSIIIKVG
REEPAMSMDTNGKIIWAKHSEIQQANLKAMGDSENKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSEYAIRESNSIVKIFKNFKE
KKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIFWSDSGELVCIA
TEESFFILRYMSDKVAASQENNEGVTEDGIEDAFEVQGEIQEIVKTGLWVGDCFIYTSSV
NRLNYYVGGEIVTIAHLDRTMYLLGYIPKDDRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFGMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSTDPEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNATMVGKLAEGAE
RDGKNNVAFMTYFLQGNLDQCLELLIRTNRLPEAAFLARTYLPSQVSRVVKLWRENLAKV
NQKAAESLADPTEYENLFPGLKEAFAAEHYLRESCLGTTRPAKDYPLVTLNEDRNILEEA
QGYEPKGTFIPTVPKQTHDSDEEVAAAPVIAAAVAAVASSQPEPVVPAAVDKEEEEEEVP
EFSKSQKEALDELEVDLDNMELDDIDTTDVNLDDDFLDD
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgaggctggacattaagcggaggctgacagccaggtcagaccgagtgaagagt
gtggaccttcacccaaccgagccatggatgctggccagtctgtacaacggcagtgtctgt
gtgtggaaccacgaaacacagactcttgtcaagacctttgaagtatgtgatctccctgtc
agagcatccaaatttgtggcaaggaagaactgggtcattacaggagcggatgacatgcag
atccgagtgttcaactacaacaccttggagcgtgtccacatgtttgaggcccactcggac
tacatccgatgcattgctgtccatcccacccagccctatatcctcaccagcagtgatgac
atgttgatcaagctgtgggactgggagaagaagtggtcgtgcagccaggtgtttgagggt
catactcactatgtcatgcagattgtcatcaaccccaaggacaacaaccagtttgccagt
gcctccctggacaggacaattaaggtttggcagctaggctcttcgtctcccaatttcact
ttggagggtcacgagaaaggagtcaattgtattgactactacagtggaggagacaaaccc
tacctcatctcaggggctgatgaccgccaagtaaagatctgggactaccagaacaagacc
tgtgttcagactctggagggccacgcccagaacgtctcttgtgtcagcttccaccccgag
ctgccaatcatcatcactggatcagaggacggtacggtgcgtatctggcactcaagcact
taccgcctggagagcactctgaactatggcatggagagagtgtggtgtgtgtgcggcctc
aggggctccaacaatgtggctctgggctacgacgaaggcagcatcattatcaaggtgggt
cgggaggagccagcaatgtctatggatacaaatggaaaaatcatctgggctaaacacagt
gaaatacagcaagccaacctgaaggccatgggtgactctgagaacaaggatggagagagg
ctgccattggctgttaaagacatgggcagctgtgagatttacccccaaaccatccagcat
aaccctaatggaaggtttgtcgtggtgtgcggagatggagagtatatcatctacactgcc
atggctttgaggaacaagagctttggctcagcacaggagtttgtctgggcgcatgactca
tctgaatatgccatcagagaaagcaacagtattgtcaaaatcttcaaaaatttcaaagaa
aagaaatccttcaagcctgactttggagctgaagggatctatggaggtttcttgcttggg
gtgaggtcagtgaatggcctggcattttatgactgggagaacacagagctgatccgccgc
attgagatccagcccaaacacatcttctggtcagactctggtgaactggtctgcatcgcc
acagaggagtccttcttcattctgcgttacatgtcagataaagtagctgcttctcaagag
aacaatgaaggagtgaccgaggatggtattgaagatgcctttgaggtccagggagagatc
caggagattgttaagactggactctgggtcggagactgcttcatctacaccagctctgtg
aacagactcaactactatgtaggaggagagatagtcactattgctcacctggacagaacc
atgtacctgctgggttacattccaaaagatgaccgtctgtacctgggagacaaggagctc
aacattgtcagctactccctgctggtctctgtcctggagtaccaaactgctgtcatgagg
agggactttggcatggctgacaaggtgcttcccacaattcctaaagagcagcgcaccagg
gtggcccatttcctggagaaacagggcttcaagcagcaggcgctggctgtgtcaacagac
cccgagcacaggtttgagctggcgctgcagctgggagagttgaagatcgcctaccagctg
gctgtggaggcagagtcggagcagaagtggaagcagttggcggagctggctatcagcaag
tgccaattcggcctggcccaggagtgcctgcaccacgcccaggattacggtggtctgctc
ctccttgccacagcgtccggtaacgccacaatggtgggcaagctggctgagggagcagag
agagacggcaagaacaatgtggccttcatgacctatttcctgcagggaaatctggatcag
tgtttggagcttctgatcaggacaaaccgactgcctgaagctgccttcctggctcgcacc
tacctgcccagccaggtgtcccgtgtggttaaattgtggagggagaacctcgctaaggtc
aaccagaaggcagccgagtctttagcagaccccacagagtatgagaatcttttccccggg
ctgaaggaagcctttgcagctgagcattacctccgagagtcctgcttgggcaccactagg
cctgccaaagattatcctcttgtcacgctcaacgaagacaggaatattcttgaggaggct
cagggatacgagcccaaaggaacctttattcctactgtccccaagcagacacatgacagt
gatgaggaagtggcagcagctcctgtcatcgctgcagcggtagcagctgtggcgtcttca
cagcctgaacctgttgtgcctgcagcagtggacaaagaagaggaggaggaggaagtccct
gaattctccaaatcacaaaaagaggctctggacgagctggaagtggacctggacaacatg
gagcttgatgacatcgacaccacagacgttaacctcgatgatgactttctagatgactga
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