Epinephelus lanceolatus (giant grouper): 117272864
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Entry
117272864 CDS
T07331
Symbol
slx1b
Name
(RefSeq) structure-specific endonuclease subunit SLX1
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
117272864 (slx1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ely03400
]
117272864 (slx1b)
DNA repair and recombination proteins [BR:
ely03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
117272864 (slx1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLX1_C
GIY-YIG
zf-HC5HC2H
zf-HC5HC2H_2
FANCL_C
zf-RING-like
T5orf172
Motif
Other DBs
NCBI-GeneID:
117272864
NCBI-ProteinID:
XP_033507875
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All DBs
Position
20:9302155..9306467
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AA seq
262 aa
AA seq
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MVVEVESFFGVYMLYCINPKFKGRIYIGFTVNPERRIGQHNAGRHRGGAKRTSGRGPWEM
VLIIHGFPSEIAALRFEWAWQHPHSSRRLSHVSRRSKKESSLQFHWRVVSNMLRVAPWNR
LPLTARWLKQEYRMDFEPSLQPPLHIPIAFGSVRAKKMLPLQSAGEEDKTSTCSLCKRLL
KESEKLSCFHPSCGMSSHVICLANHFLKSEPSHLLPVEGECPSCCHSVLWGSLIRHKHGC
FGDLEEITLSASQGHWADELQI
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggttgtggaggtagaaagcttcttcggtgtgtacatgttgtactgcatcaatcctaaa
ttcaaaggccgtatttacatcggcttcactgtgaaccctgagcgcaggatcggacagcac
aacgctggacggcacagagggggagccaagaggaccagtggaagaggaccatgggagatg
gtcctcattatacatggctttccttctgaaattgctgccctcaggtttgagtgggcgtgg
cagcaccctcactcctccaggcgtctctcccatgtctcccggcgctccaagaaagagtcc
agcctgcagttccactggcgggtcgtctcaaacatgctgcgggtggcgccgtggaacaga
ctgccgctgacggctcgctggctgaaacaggagtacaggatggactttgagcctagtctg
cagcctccgctgcacatccccattgcttttggaagtgtgagagccaaaaagatgctgcct
ctgcagtctgcaggagaggaggacaagacatccacttgttctctctgtaaaaggctgctt
aaggagtcagaaaagctgagctgtttccacccatcctgtggaatgagcagtcatgtgatc
tgccttgctaaccatttcctgaagtcagagccgtcccacctcctgccagtggagggtgaa
tgtccgtcgtgttgtcactctgttctgtgggggagcctcatccgccataaacatggctgc
tttggggacctagaggagatcacgctgtctgcatcccagggccactgggcagatgagctg
cagatatga
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