Epinephelus lanceolatus (giant grouper): 117272893
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Entry
117272893 CDS
T07331
Symbol
gigyf1a
Name
(RefSeq) GRB10-interacting GYF protein 1 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ely03019
]
117272893 (gigyf1a)
Messenger RNA biogenesis [BR:
ely03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
117272893 (gigyf1a)
Surveillance factors
Other surveillance factors
117272893 (gigyf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
Motif
Other DBs
NCBI-GeneID:
117272893
NCBI-ProteinID:
XP_033507919
LinkDB
All DBs
Position
20:13529014..13556618
Genome browser
AA seq
1095 aa
AA seq
DB search
MTAETLNFGPEWLRALSSGGSVTSPPPSPAMPKYKLAEYRYGREEMLALYIKDNKVPEDM
QDKEFAAILQDEPMQPLALVPLTEEEQRNFSMSVNSVAVLRLMGKGVGGAAPAGVVRGRG
ATRGGRGRGRGEGGFYQRSIEDAEVGFGRSVREIHRSQSWDDRGERRFEKPLRREVGRPG
FEETGGPAGPGRKEHTRADSDNWRILREEQEEEEGAEPGTNWRIAGPRRDDGGPRSAGWR
DHTGPGESRRRKFDFDFRDSEGHGGGRRRAGSEGLEDDRDGLPEWCTDEEDGEMGTFDSS
GAFMPLKKGGKETILEEELEFKGIEEEEEEESFADMEGNSAEGDKDKESKDAGSAVGDGE
TKPASPSSSPTAPQHCTPPSLEPRPSNAGPAVDNPQLSNSHPVKANNTPSEDMAPAGGSK
AQLSPGAPASSSLPPPPPSSAAPLLPPPGGDAEDDEGMKHLQQEAEKMVASLQDTSLEEE
CFTQALQQQQESRNTAAALPLSHEAAMKWFYKDPQGEIQGPFTTVEMCEWFQAGYFTMTL
LVKRGCDEGFQPLGDVIKMWGRVPFAPGPSPPPLLVRQPPPTQRPQPNRGPAGTVSQSSA
NVEDGEGRMQRRGKIDRQVTGNLDQDRLKKQQELAAAAAIYQQLQQQQLFQLINRCSEQG
MMPSMNRSMSVPDTGSMWDMHTSASQPSGGEASLWDITMNPSTQGPTLEQLQKLQQERRD
AELRAKREEEEQRKRREEKRRQQEEQKRREEEELFRRKQCRQQQELIMKLLQQAPQQQGP
GAGSSGWSGTPSSGLSKAGKPPALALLEMQQEAERLLKQQQQQRAQQQRDRHSGMSMGSS
SMGGQWVDGVGMWGGGMEGKGGSGSSSGSMGMWDEAVKNQSSLRGNSNNNMGLKNSRSSP
SLSDQYMMRRKRTDEEEKLLKLLQGMKPQDGFTTWCEQMLHALNTSANNSSSSLDVATIV
AYLKEVESPYAVLDFIRSYLGDTVEAKEFAKQFLERRAKQKANQQRQQQQLSKEVAGLNM
NFPLQDSMRGMNPSTLQSMFQASHMGKAGLYDNQGGKMKKKQPMMLHSDPSILGYSFHNT
GECLSLNEMEMVEDY
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgagactcttaacttcggcccagaatggctccgtgcactgtccagtgggggg
agtgtgacgtccccccctccttcccccgccatgccaaagtacaagctggccgagtaccgc
tacggccgagaggagatgttagcactttatatcaaagacaacaaggtcccagaggacatg
caggataaggagtttgctgctattctgcaagatgagcccatgcagccactggcactggtg
cctctcactgaggaggagcagaggaacttctccatgtctgtgaacagtgtggcggtgctg
aggctcatgggaaaaggggtgggcggggccgccccagctggagtggtccgaggacgaggg
gccacacgaggcggtcgaggacgaggtcgtggtgaaggtggattctaccaaagaagtatt
gaagatgcggaggtgggtttcggccgcagcgtccgagagatacaccgcagccagagctgg
gatgaccggggcgagcgtcgatttgagaaaccgctgcggcgggaggtggggcgtcctggc
tttgaagagactggaggtcccgcgggtccagggaggaaggagcacacaagggctgacagc
gataactggcgcatcctccgggaggagcaggaggaggaggagggggcggagcctggcacc
aactggagaattgctggaccccgcagggatgatggtggtcctcgctcagcaggctggcgg
gaccataccggtccaggtgagagtcgtcggaggaagtttgattttgatttccgggactct
gagggccacggtggtggccgccggcgtgcaggcagcgagggactggaggacgacagggac
ggcctgcccgagtggtgtacagatgaggaggatggagagatgggcacatttgactcctct
ggagcttttatgcctttgaagaagggtggcaaggagacaatcctggaggaggagttggag
tttaaggggatagaggaggaggaggaagaggagagctttgctgacatggaggggaacagt
gccgaaggagacaaagacaaggagagtaaagatgctggctctgctgtgggggatggcgag
acgaagccagcgtcaccatcctcctcacctacagctccccaacactgcacccctccatcc
ctggagcctcggcccagcaacgctggcccagcggtggacaaccctcagctgagcaacagc
caccctgttaaggccaacaacacgcctagtgaagacatggctccggcagggggctccaag
gcccagctgagccccggcgcccccgcctcctctagtctgcctcccccacccccttcctct
gctgctcctctcctccctccacctggaggagacgcagaggacgatgagggcatgaagcac
ctgcagcaggaggcagagaagatggtggcatcactgcaggacacttctttggaggaggag
tgtttcacccaggctctgcagcagcagcaggagagcaggaacacagcagctgctctgccg
ctgtcacatgaggctgccatgaagtggttctacaaggacccgcagggagagatccagggt
ccattcaccacagtggagatgtgcgagtggttccaggctggctacttcaccatgaccctg
ctggtgaagcggggctgcgacgagggcttccaacccctgggggacgtcatcaagatgtgg
ggccgcgtgccgttcgccccggggccctccccgccgcccctgctggtgagacagccacca
ccaacgcagcgcccgcagcccaaccgggggcccgccgggactgtgagtcagagctcagcc
aacgtagaggatggggaggggaggatgcagaggagagggaagattgatagacaggttacg
ggaaacctggaccaggatcgcctgaaaaagcaacaggagctggcagcagcagcagctatt
tatcagcagctccaacagcagcagctattccagctcattaacaggtgcagtgagcagggt
atgatgccttcgatgaacaggtcgatgtcagtgccagatacagggtccatgtgggacatg
catacctcagcttcacagccgtcaggcggtgaagccagtctttgggacataacaatgaat
ccttctactcagggtccaactctcgaacagcttcaaaagctccagcaggagaggcgagac
gctgaactcagggcgaagcgtgaagaggaggagcagcgtaagaggagggaggagaaaagg
aggcaacaggaggagcagaagaggagggaggaggaggagctctttagacgcaagcagtgt
cgccagcagcaggaactgatcatgaagttgctgcagcaggccccccagcagcagggtcct
ggggcaggcagctcaggctggagcgggactccctcctctgggctatccaaggcaggaaag
cccccggctctggctctgctggaaatgcagcaggaggcagagaggctcctgaagcagcag
cagcagcagagagcccagcagcagagagaccgccactccggcatgtcgatggggagctcc
tccatgggagggcagtgggtggatggtgttggcatgtggggcggaggtatggagggtaag
ggtggcagtggaagctcttcaggcagcatgggcatgtgggacgaggctgtgaagaaccag
tccagcctccgtggcaacagcaacaacaacatgggcttgaagaacagccgcagcagcccc
tcactcagtgatcagtacatgatgcgtcgtaagcggactgatgaggaggagaagctgctg
aagctgctgcagggcatgaagcctcaggacggcttcactacctggtgtgaacagatgctg
cacgctctcaacacctctgccaacaactcctcctcctctctggatgttgccactattgtg
gcatacctgaaggaggtggagtctccctatgcagtactggacttcatccggtcctaccta
ggggacacagtggaagccaaagagttcgccaaacagtttctggagcgacgtgccaaacag
aaagccaaccaacagagacagcagcagcagttatcaaaggaggtggctggactgaacatg
aacttccctctgcaggactcaatgcgaggtatgaatccaagcaccctgcagtccatgttt
caagccagccacatgggcaaggctggtctctatgacaaccagggcggaaagatgaagaag
aaacagcccatgatgctgcactctgaccccagcatcttagggtactcattccacaacacg
ggcgagtgtctgagcctgaatgagatggagatggtggaggattactga
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