Elizabethkingia sp. 2-6: FCS00_03395
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Entry
FCS00_03395 CDS
T06039
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
elz
Elizabethkingia sp. 2-6
Pathway
elz03030
DNA replication
elz03410
Base excision repair
elz03420
Nucleotide excision repair
elz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
elz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FCS00_03395 (polA)
03410 Base excision repair
FCS00_03395 (polA)
03420 Nucleotide excision repair
FCS00_03395 (polA)
03440 Homologous recombination
FCS00_03395 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
elz03032
]
FCS00_03395 (polA)
03400 DNA repair and recombination proteins [BR:
elz03400
]
FCS00_03395 (polA)
Enzymes [BR:
elz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FCS00_03395 (polA)
DNA replication proteins [BR:
elz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FCS00_03395 (polA)
DNA repair and recombination proteins [BR:
elz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
FCS00_03395 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FCS00_03395 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
RNase_H_2
HHH_2
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
QCO45456
UniProt:
A0ABD6YL27
LinkDB
All DBs
Position
complement(740947..743763)
Genome browser
AA seq
938 aa
AA seq
DB search
MDATQDKRLFLIDAYAMIFRGYYALIRSPRLTSKGMNTSAIFGFTNSLIELIKREKPTHL
AVVFDVGGKTLRHDDFEEYKANRSETPEAIKIAVPYIHQILEAMHIPILGVEGYEADDVI
GTLSYKAESEGYNVYMVTPDKDFAQLVTDRVKIYKPGMKGGDIEILGVEEVKAKYDIQDP
KQVIDFLAMMGDSVDNIPGLEGVGEKTAKKFLQDYGSIENLLANTADLKGKLKEKVEASA
ERGILSKKLATIMIDAPIDFHQEQYDLEAPDFEKVKEIFEELEFRRLYENMYRAFAPKGE
PVQATAEETVKKVSPQAEQLNLFSSFDELDAATSSKKDIKTNDHLYQYVDSPKALSVLVR
NLLEKPALAFDTETTSLNELEAQLIGVSFSYKKGLAYYIPMPEDKQEAQVLLDIMRPVFE
KEDQIKIAHNLKFDYKVLHQQGVEVKGKLFDTMIAHYLLSPDGRHGMDYLSEMYLDYIPV
SIETLIGKKGKKQGTLRDVSVAEQTAYAAEDADVTFQLYELFAPQLKSENLEKLFTEVEM
PLVNVLARMELAGVSLDKDWLAQESVDLESDLKKLEQEIFELSGEEFNMNSPRQLGDILF
EKMQLDPKAKKTKTGQYATSEDILQKLASKHEIIKHILEYRQLQKLKSTYVDALPTQIDA
FDNRVHTNFSQTTAATGRLASVNPNLQNIPIRTLRGQQIRGAFVAGEGKKLISADYSQIE
LRLIAEISGENNMLEAFNQGADIHASTAAKLFKIPIEEVSKIQRSQAKTVNFGIIYGQGA
FALAEQTGLSRSEAKAMIDAYYETYPRLREYMDEQVKKARDLGYVETILGRKRHLTDINS
NNFVVRGHAERNAVNAPIQGSAADIIKLAMIRIDQQLEEKKMNTKMLLQVHDELVFESPI
SEIEKASKLIKTEMESAYPTKVPLVVEVGVGDNWLEAH
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaacacaagacaaaaggctctttcttatcgatgcctacgcaatgattttccgt
ggatattatgctttaatcagaagtccgagattaacaagcaaggggatgaatacctctgca
atctttggatttactaattcattaatagagcttataaaaagagaaaagccaacacatctt
gctgttgtatttgatgtgggaggtaaaaccctgcgtcatgatgactttgaagaatacaaa
gccaatcgttccgaaacaccggaggctattaaaatagcagttccgtacatccatcagatt
ctggaagcgatgcatattcctattctcggagtagaaggttatgaggccgacgatgttata
ggtaccctttcttataaggccgagagtgaaggctataatgtatacatggtaacaccagat
aaggattttgcccagctggttacagaccgtgtgaaaatatacaaacccggaatgaaaggt
ggagacatcgaaattctgggtgtagaagaagtaaaagcgaagtacgatattcaggatcct
aagcaggtaattgacttcctggcaatgatgggggatagtgtagataatatcccgggactg
gaaggtgttggtgaaaaaacagctaaaaagttcctgcaagattatggtagtatagaaaat
cttttggcaaatacagctgatctgaaaggaaagctgaaagaaaaagtagaagcaagtgcg
gaaagaggtatactctccaaaaaattggcgacgattatgatcgatgctccaatagatttc
catcaggagcaatacgatctggaagcacctgattttgaaaaagtaaaagaaatattcgag
gaactggagttccgtagattatacgaaaatatgtaccgtgcttttgctccgaaaggagaa
ccggtacaggcaacagctgaagagaccgtgaagaaagtctcaccacaggcagagcagctt
aatttattctcaagttttgacgagctggatgcagcaacctcttctaaaaaagatattaaa
accaacgaccatttatatcagtatgtagattcgccaaaagcgctttcggtattggtgaga
aatcttttggaaaaacctgcattagccttcgatacagaaactacttctttgaatgagttg
gaagcgcagctaattggtgtttctttctcttataaaaaaggcttggcttattatattccg
atgccggaagataagcaggaagctcaagttcttttggatattatgcgtccggttttcgaa
aaagaagaccagataaagatagcccataatctaaagttcgactataaagtacttcaccag
cagggtgtagaggtgaagggaaaactttttgatacaatgatagctcattacctgctaagt
ccggacggacgtcatggtatggactatctgtccgaaatgtatctggattatataccggtt
tctattgaaactttaatcggaaaaaaaggcaaaaaacaaggcacattaagagatgtgagc
gtagctgagcaaacagcttatgcagcagaagatgctgatgttactttccagttatatgag
ttgtttgccccgcagttgaaatccgaaaacctggagaaactttttactgaggtggaaatg
ccgttggtaaatgttttagcacgtatggagcttgccggagtttcgttggataaagattgg
ctggcgcaggaaagcgtagatttggaaagcgaccttaagaaattggaacaggaaatattt
gaactttccggtgaagagtttaatatgaactctccacgtcagttaggggatattttgttt
gaaaaaatgcagcttgatccaaaggctaagaaaaccaaaaccggacaatatgcaacttct
gaagatatccttcaaaaactggcttctaagcatgaaattattaaacatatattagaatac
cgtcagttacaaaagctgaaatctacctatgtagatgctttacctacacagattgatgct
tttgacaacagagtacataccaatttctcacaaacgactgctgctaccggacgtttagca
agtgttaatccaaacttacagaatattccgatccgtacacttcgtggccagcagattcgt
ggtgctttcgttgccggagaaggaaagaagctaatctccgccgattattctcagatagag
ttgagactaattgctgagataagtggagagaataacatgctggaagcttttaatcaggga
gcggatattcatgcttctacggcggctaagctatttaaaattccgattgaagaagtatct
aaaatacaaagaagccaggcaaagactgtaaactttggtattatatatggtcagggagct
tttgcgttggcagaacaaaccggactttcccgttcagaagcaaaagccatgatcgatgct
tactatgagacttatccgagacttcgtgagtatatggacgagcaggtgaagaaagcacgt
gatctaggttatgtagaaactattctagggagaaaacgccaccttaccgatatcaactcc
aataattttgttgtacgtggccatgcggaacgtaatgctgtaaatgctccgatacaggga
agtgctgctgatattataaaactggcaatgatcagaatagaccaacagttggaggaaaag
aaaatgaataccaaaatgctgcttcaggtacatgacgaattggtgtttgaatctccgata
agtgagattgaaaaggcatcaaagcttatcaaaaccgaaatggaaagtgcatatcctaca
aaagtgccgttggtggtagaggttggagtgggtgataactggctggaagcacactaa
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