Elizabethkingia sp. 2-6: FCS00_09710
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Entry
FCS00_09710 CDS
T06039
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
elz
Elizabethkingia sp. 2-6
Brite
KEGG Orthology (KO) [BR:
elz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
elz03032
]
FCS00_09710 (topA)
03400 DNA repair and recombination proteins [BR:
elz03400
]
FCS00_09710 (topA)
Enzymes [BR:
elz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FCS00_09710 (topA)
DNA replication proteins [BR:
elz03032
]
Prokaryotic type
DNA Topoisomerases
FCS00_09710 (topA)
DNA repair and recombination proteins [BR:
elz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FCS00_09710 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
MarR_2
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
QCO46633
UniProt:
A0ABD6YP88
LinkDB
All DBs
Position
2089167..2091707
Genome browser
AA seq
846 aa
AA seq
DB search
MSKNLVIVESPAKAKTIQKYLGNDFEVTSSMGHIRDLPKKGMGINLETFTPDYEVSPDKK
KLVTELKSLAKKADMVWLASDEDREGEAIAWHLAEELKLKEDKTKRIVFHEITKNAILKA
IENPRKIDNNLVNAQQARRVLDRIVGFEMSPVLWKKVKPGLSAGRVQSVAVRLVVEREKE
IHGFQSQASYKVEGTFLNDEKKEILAKLKKDFSTEQEAESFLNQCSTTDFKVLNVEKKPG
QRSASAPFTTSTLQQEASNRLGYSVTSTMRVAQRLYEEGYITYMRTDSVNLSQEAINSAK
ATITKEFGEEYSAPRNYTTKNASAQEAHEAIRPTDFGVKTVGDAQLNKLYQLIYKRAMAS
QMANAKIEKTVIEIGNQKLPQHFEATGEVIIFDGFLKVYGITKNEEEDDENDDKLLPKVN
VGEALKYKKIIATEKYTKAPARFTEASLVRKLEELGIGRPSTYAPTIQTIQNREYVDKRE
IMAKEREIVQLTLTSSLKKETLTEKYGADKNKFLPTDIGVVVNDFLVNNFNEVLDYGFTA
RVEEAFDIIAEGNRAWKDVMTEFYGKFHPRIADVEENADRANGDRVLGVDPKTGKNVHAR
IGRFGAMIQIGETDDEEKPIFASLMPNQNITTITFEEAMELFKIPFNLNDYEGKEVVVGV
GRFGPYIKWGEAYISIPKTEDPLSVDNDRAIEIIEEKKRADAPIATYKGEPVTKGTGRFG
PFIKYKDIFVNVPKKYDFNNLSQSDINELIDAKLEKEANRYIQQWEDQKVSLENGRWGPF
IRFGKKMLKIPLKGKGEKYTAEDLQDISFDEVKKWIIAQDETAFKEKPKAKKAPAKKAAA
KKPSKK
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaaatctcgtaattgtggagtcccctgcgaaggctaagacgatacagaagtat
cttggtaatgattttgaagtaacctctagtatgggacacatccgtgatcttcctaaaaag
ggcatgggtattaaccttgaaacatttactcctgattacgaagtttctccagataagaag
aagctcgttacagagcttaagtctttagccaaaaaagccgatatggtatggctggcttcc
gatgaagaccgcgagggggaagctattgcatggcatctggcggaggaattaaaattaaaa
gaagataaaactaaaagaattgtatttcatgagattactaagaatgcaattcttaaagct
atagagaatccgagaaaaatagacaataatcttgtcaatgctcaacaggcaagaagagta
ctggatagaattgtaggttttgaaatgtctcctgttttatggaagaaagtaaaaccaggt
ctttctgcaggtcgtgtacagtcagtagcagtacgtcttgttgttgaaagagaaaaagaa
atccacggatttcagtctcaggcgtcttataaagtagaaggaactttcctgaacgatgag
aagaaagaaatcttagcaaaactaaaaaaggacttctctacagaacaagaagctgaatct
ttccttaaccaatgcagtactacggacttcaaagttttaaatgtagaaaaaaaaccgggg
cagcgttccgcttcagctccgtttactacttctactctacagcaggaagcttcaaacaga
ttaggatattccgtaacctctacaatgcgtgtagcgcagcgtctatatgaagaaggttat
attacctatatgagaacggatagcgttaacctttctcaggaagctattaattcggcaaaa
gcaactattacaaaagaattcggggaagaatattctgcaccgagaaactatactactaag
aatgcatctgctcaggaagcccacgaagcaattcgtcctaccgattttggtgtgaaaaca
gtaggagatgcacagcttaacaaattataccagctaatatataaaagagcaatggcaagt
cagatggccaatgctaaaattgagaaaacagtaattgagataggaaatcagaaacttcca
caacattttgaggcaactggtgaagtgattattttcgatggtttcttaaaggtatatggt
attactaaaaatgaagaggaagatgatgagaacgatgataaacttctgccaaaggtaaat
gttggtgaggctcttaaatacaaaaaaatcattgctaccgagaaatatacaaaagctcct
gcaagatttacagaagcatcgctggtaagaaaactggaagaactgggaattggaagacct
tccacttatgctccaacaatccagacgatccagaatcgtgagtacgtggacaagagagaa
attatggctaaagaacgtgaaattgttcagcttactttaacttcttcactgaaaaaagaa
acacttacagaaaagtatggtgctgataagaacaaatttctaccaactgatataggtgtt
gttgttaatgattttcttgttaataacttcaacgaagttcttgattacggatttacagct
cgtgttgaggaagctttcgatattattgcggaaggaaacagagcatggaaagatgtcatg
actgaattctatggaaaattccacccaagaattgctgatgtagaagaaaatgccgacaga
gcaaacggtgaccgtgtattgggagtagatcctaaaacgggcaaaaatgtacatgcaaga
atcggaaggttcggtgctatgatccaaatcggagaaacagatgatgaagagaaaccaatc
tttgcttctctgatgccgaatcagaatatcactacaattacttttgaggaagcaatggag
cttttcaaaataccttttaatcttaatgattatgaaggtaaagaagttgtggtgggtgtt
ggacgttttgggccttatatcaagtggggagaagcttatatcagcattcctaaaactgaa
gatcctctgtctgtggataatgacagagcaatcgagattatagaagaaaagaagagagcc
gatgctcctattgcaacttataaaggagagcctgtaactaaaggaaccggaagattcgga
cctttcataaaatataaggacatctttgtaaatgttccgaagaaatatgattttaataat
ctttctcaaagtgacatcaacgaactaattgatgccaaactggaaaaagaagctaacaga
tatattcagcaatgggaggaccagaaggtttctcttgaaaacggaagatggggacctttc
attcgttttggaaagaaaatgttgaaaatcccattgaaaggaaaaggagaaaaatatact
gctgaagatttgcaggatatttccttcgatgaagtaaaaaaatggatcattgctcaggac
gaaactgcttttaaagaaaaaccgaaagcaaaaaaagcgcctgcaaagaaagctgctgct
aaaaaaccttctaaaaaataa
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