Elizabethkingia sp. 2-6: FCS00_10165
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Entry
FCS00_10165 CDS
T06039
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
elz
Elizabethkingia sp. 2-6
Pathway
elz03030
DNA replication
elz03430
Mismatch repair
elz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
elz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FCS00_10165
03430 Mismatch repair
FCS00_10165
03440 Homologous recombination
FCS00_10165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
elz03032
]
FCS00_10165
03400 DNA repair and recombination proteins [BR:
elz03400
]
FCS00_10165
Enzymes [BR:
elz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FCS00_10165
DNA replication proteins [BR:
elz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FCS00_10165
DNA repair and recombination proteins [BR:
elz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FCS00_10165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
DNA_pol_A_exo1
RNase_H_2
DNApol_Exo
Motif
Other DBs
NCBI-ProteinID:
QCO46722
LinkDB
All DBs
Position
complement(2182161..2183384)
Genome browser
AA seq
407 aa
AA seq
DB search
MYSIIDIESNGGAFKKESIIEIAIYRFDGHEIVDQFISLVNPEDVISPYVQKLTGITAKM
VKTAPKFHEIAKRIVEITEGSVIVGHNVEFDYRMIRQSFHRLGYNYERETIDTIPLAKKL
IPNEESYSLGKLSKSLGIPLTDRHRASGDARATVELFKILLAKDQEKEILKHQKETQVSN
NLNKKITTLTEFLPAENGIIYFQNAKGDILYTDYSSNIYQTATKIFHARTKKWDKLKAET
TQIHYEFTGNELIAKLMMLQKTKKKTPSLPFGLYYKNDKYIIERTKGQTGDLLKFKSFSQ
GNKVKTFINEQERFQDNPIALKEFLSLDNRNEIWISEGRTKSEKSFLVLEKGKLTGYGFY
ELHHQIKSLNKINKLKIEIHAVNNMIYNELKLSLLRNNYEIKNLPTT
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
ttgtattcaattatagatattgaaagtaatggcggtgctttcaagaaagaaagtattatc
gaaattgctatataccgattcgatggacacgaaatcgtagatcagtttatatctctggta
aatcctgaagacgtaatttctccgtatgtccagaaactaacagggatcacagccaaaatg
gtaaagacagcacctaagtttcacgaaattgcaaaaaggattgttgaaatcacggaaggt
tccgtaatcgtagggcataatgtagagtttgattatcgaatgatcagacaatcgtttcac
agattaggatacaactatgaaagagaaacaatagatacaattccgttagcaaaaaaatta
attccaaatgaagaaagctactctctgggtaagctttccaagtctttgggaattcccctc
acggatagacaccgtgcatccggggatgccagagcgactgtggaattgttcaaaatatta
ctggcaaaagatcaggaaaaagaaattctgaaacaccagaaagagacgcaggtatctaat
aatctgaataaaaagattacgacacttacagagtttcttccggcagaaaacggaattatc
tattttcagaatgcaaaaggtgatattctgtataccgattattcatctaatatttatcag
acagcaacaaagattttccatgcccggacaaagaaatgggacaagctaaaagctgaaact
actcagattcattatgaatttacggggaatgagcttattgcaaaacttatgatgctgcaa
aaaacgaaaaagaaaacgccttcgttgcctttcggattgtattataagaatgataaatac
ataatagaaagaaccaaggggcagacaggtgatttactgaagtttaaatctttttcacaa
gggaataaggtgaagacttttatcaatgaacaggagcgttttcaggataacccaatagct
ttaaaagagtttctttcattagataatcgtaatgaaatatggatttcagagggaagaact
aaaagtgaaaaatcatttttagtactggaaaaaggaaaactgacggggtacggattttat
gaacttcatcaccagataaagtctttaaataagattaataaactgaaaattgaaattcat
gcagtaaataatatgatatacaacgaattaaaattatctttgctgcgcaataattatgag
ataaaaaatctgccaacaacataa
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