Elizabethkingia sp. 2-6: FCS00_14360
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Entry
FCS00_14360 CDS
T06039
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
elz
Elizabethkingia sp. 2-6
Pathway
elz02020
Two-component system
elz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
elz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FCS00_14360 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
FCS00_14360 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
elz03021
]
FCS00_14360 (rpoN)
Transcription machinery [BR:
elz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FCS00_14360 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
Med9
Carn_acyltransf
Motif
Other DBs
NCBI-ProteinID:
QCO47495
UniProt:
A0A4P8E8U7
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All DBs
Position
3098663..3100126
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AA seq
487 aa
AA seq
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MLKQNLQIKLGQKMAPQQIQLMKLIQLHTLEFEEELQRELEENPALEKAVDEAKEDDYSD
IDSSYDDEGTESIETDFDVNEYLFDDEPSYKTAASNYSPDDEEFDNQSLLTEGQSLYDYL
IEQIRLTKIGEEDLKIAEYIIGNLDNDGYLRRDIKSLVNDMAFSLGVYTTPENVEDVLTN
YVQKLDPPGVAARDLKECLLLQIEKKVSGNPAVSLAHNILLHQFDALSNKHYNKIMHKYD
VEEDDLKDALDEISKLSPKVGGNFDTQTITINQEIIPDFVINVKDGKVTAALNSKNAPQL
RVSDEYKEILTTYSHDKTSQEHKQAALFIKQKLDAAKWYIDAINQRQNTLMQTINAIIRL
QKDYFITGDDKSIKPMILKDVADITGFDISTISRVVKSKYADTPNGIVYLKNLFSDSLTN
DDGEEVSTKEIKNHLQDIIDKENKRKPYTDDALVGMLKDKGYNIARRTIAKYREQLNIPV
ARLRKEL
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaacaaaatttacagataaaacttggccagaaaatggcaccgcaacaaattcag
ctgatgaagcttatccagctccatactcttgaatttgaagaagaattacaacgggagctg
gaagaaaatccggcgttggaaaaagctgtggacgaagccaaggaagatgattattcggat
attgatagtagttacgatgatgaaggaacagaatctatagaaactgatttcgatgtaaat
gaatacctgtttgatgacgaaccttcttataaaactgcagcgagtaactactcgccggat
gatgaagaattcgataatcagtcgttgcttacagaaggacagtccttgtacgattacctt
atagagcagatccgattgacgaagattggtgaggaggatctgaaaatagcagaatatatt
ataggtaacctggacaatgacggttatctgagaagagatataaagtctctggttaatgat
atggctttttcattgggagtatatacaacacctgaaaatgtagaagatgtattaaccaat
tatgtacaaaaactggatccaccaggagtagcagcaagagatttgaaagaatgccttctg
ctacagattgagaaaaaagtaagcggaaatccggcagtgtcattggctcataatatttta
cttcaccagtttgatgctttaagtaacaagcattataacaaaatcatgcataagtatgat
gtagaggaggatgatctgaaagatgcgttggatgaaatctctaagttatctcctaaagtt
gggggcaatttcgatacgcagaccattacaatcaatcaggaaatcattccggattttgtc
atcaatgtaaaagacggaaaagtcacagcagcactaaacagtaagaatgctccgcagctc
cgtgtttcagatgagtataaagagattttgacaacttactcgcatgataaaacatcccag
gagcataagcaggcagctctgtttatcaaacaaaagctggatgctgcaaaatggtatata
gatgctattaatcagcgtcagaatacattgatgcagaccattaatgctattataaggtta
cagaaagattactttattaccggagatgacaaaagtataaagcctatgattctgaaagat
gtagcagatattacaggttttgatatttctacaatttcccgtgtggtaaaaagtaaatat
gctgatacacctaatggtatcgtttatctgaagaatcttttctcggatagtcttacaaat
gatgacggtgaagaggtttcaaccaaagagattaagaatcacctgcaggatattatagac
aaagaaaataaaagaaaaccttataccgatgatgcattagtaggaatgctgaaagataaa
ggatataatattgcccgacgtactattgctaaatacagagagcagctgaatattccggta
gcaagattaagaaaagagttataa
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