Elizabethkingia sp. 2-6: FCS00_19070
Help
Entry
FCS00_19070 CDS
T06039
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
elz
Elizabethkingia sp. 2-6
Pathway
elz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
elz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FCS00_19070 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
elz03400
]
FCS00_19070 (priA)
Enzymes [BR:
elz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FCS00_19070 (priA)
DNA repair and recombination proteins [BR:
elz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FCS00_19070 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
Zn_ribbon_PriA
Helicase_C
Cas3-like_C_2
AAA_19
nSTAND6
AAA_30
NB-ARC
PhoH
DUF4885
Tudor_5
NPHP3_N
IstB_IS21
TsaE
nSTAND3
Zeta_toxin
AAA_16
DUF7571
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
QCO48360
LinkDB
All DBs
Position
4151148..4153589
Genome browser
AA seq
813 aa
AA seq
DB search
MMFAQLILPLNIKGTYTYKVPVFLYGKLAIGMRVVVPFGGKKLYTGIVAEIHDREPEAFL
PKEIISALDNEAILPEEQLKFWQWVSDYYLCNVGEVYRFAFPSSLKLESETYVKRNPDVE
VDYEVLDVHEIHLMQALEVKSVINLQELEAFIPRKEIMKTLNSLIDERLIVIDEKISEKY
KAKEVSYIRLKEGLLESVALHEILSILNKAPKQKDLFLAILDKATSEDPFVKKSELFEDK
FFSSQQLKALVDKGYVEEFYLQKDRIDSYDGDLEQIEQLTDLQQKALWEIVKQYEEKDVV
LLHGVTGSGKTHLYISKIEETVASGKNVLMLFPEVALTKQITQRLEKKYGQLLGFYHSKL
TDFEKVEIWRKVKNNQLKIVLGTRNALFLPFQNLGMVIVDEEHDSQYKTTTVQPFFNAKD
AAIVLGKFYKAKVLLGSATPSVESYYSALTNKIGLVKLDERFGESKVPKINLIDFKEAQN
LKTTNGSFTMQMIMEIREQLEQKKQVIILHNRRGYANVIECESCGYTQYCSNCDVVMTYH
KVSNELKCHYCGQRSAVPKQCPSCRSENLTTKGLGIQQLEEEVQRLFPESEVGRMDLDAM
RTKFAYEKFFERVENQELDIIIGTQMISKGLDFDYVDLVVVPKSDAMLHIQDFRAEERAY
QLFTQMAGRAGRTSQHGIMLLQTYNPYQTIFEKLSKDPDHIYEYFIQERNRFLYPPFVKL
IFIELKHRREDKVERASQFLGSVLRKYLPEECILGPEKSQIFRINNLYQYQILLKLPKGK
KYNLFKQFVSTSIDEFNEISGYKSVKLNLYVDF
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttgctcagctcattttaccattaaatattaaaggaacttatacctataaagtt
cctgtttttttatatggtaaactggcgatcggaatgcgtgttgtagttccttttggcgga
aaaaaactttatacgggtattgttgctgaaattcatgacagagaaccggaagcattttta
ccaaaagaaattatttccgctttggataatgaagctatcctgccggaggagcaactgaaa
ttctggcaatgggtttctgattactatttgtgtaatgtaggtgaagtataccgctttgca
tttccttcttctttaaaactggaaagcgaaacttatgtaaagaggaatccggatgtagaa
gttgattatgaagtgctggatgtccacgagatacatctgatgcaggcattggaagtaaag
tctgtgattaatctccaggaacttgaagcatttattcccagaaaagagatcatgaagacg
cttaacagtctaatcgacgagcgtctgattgttattgatgagaaaattagcgaaaagtat
aaagctaaagaggtttcatatatcagattgaaagaaggactgctggaaagcgtagcactc
catgaaatcctttctatactgaataaagcgcctaaacaaaaagatctttttctggccatt
ctggataaagcaacatccgaagatccgtttgtaaaaaaatcagaactttttgaagataaa
tttttcagcagtcaacagctaaaagcacttgttgacaaaggctatgtagaagagttttat
ttgcaaaaagatcgtatagactcgtatgacggggatttggaacaaatagaacagcttaca
gatcttcagcaaaaagctttgtgggaaattgtaaagcagtacgaagagaaagatgttgtc
ttgctacatggtgttacagggtctggtaaaacccacctgtatatttccaaaatagaagaa
acggtagcttccggaaaaaatgtattaatgcttttcccagaagtcgcattgactaagcag
attacccaaagattagagaaaaaatatggacagttactcggtttttaccattccaaatta
accgactttgaaaaggttgaaatttggagaaaggtgaaaaataaccaactgaaaattgtt
ctgggaactcggaatgcactctttttaccatttcagaatctcgggatggtaattgtagat
gaagaacacgattcacaatataaaacaacaactgttcagccctttttcaatgccaaagat
gcggcaattgttttaggtaaattttacaaggctaaagttctgctgggcagtgcaacacct
tcagtagaatcttattattcggccttaaccaataaaattggactggtaaaattagatgaa
cgttttggcgaaagcaaggttcctaagatcaacctgattgactttaaagaagcacagaat
ctgaaaacaaccaatggcagctttacaatgcagatgattatggagatcagggagcaattg
gagcagaagaagcaggttatcatccttcacaatcgccgtggatatgccaatgtgatagaa
tgtgaaagctgtggttatacacaatattgtagcaattgcgatgttgtgatgacttatcat
aaagtatccaacgagctgaagtgtcactattgtggtcaaagatcagctgtgcctaagcaa
tgtccatcctgtcgttcagaaaatcttactacaaaaggtttgggaattcagcaattggaa
gaagaagttcagcgtctatttccggaatcggaagttggacgaatggatctggatgctatg
cggactaaatttgcttacgagaagttctttgaaagagtagaaaatcaggaactggatatt
attattggtacccagatgatttctaaaggactggattttgattatgtggatcttgttgtg
gttccaaaatcggatgcaatgttgcatattcaggacttccgggcagaagaaagagcttat
caacttttcactcagatggccggacgcgccggaagaacttcgcaacacggaataatgctg
cttcagacttataatccctaccagaccatttttgagaaattgtcaaaggatccggaccac
atatacgaatactttattcaggaaagaaacagattcttatatccgccttttgtgaaatta
attttcatagaattaaagcaccgccgagaagataaagtagaaagagcatcccagtttcta
ggctctgtcctaagaaagtatttgccggaagaatgtatactaggaccagaaaaatcacag
attttcaggattaataatttataccagtatcagattttactaaaacttcctaaaggaaaa
aaatacaatctgttcaaacaatttgtctctacttcaatagatgaattcaatgaaatttcg
ggttacaaaagtgtgaaattgaatctctatgtcgatttttaa
DBGET
integrated database retrieval system
