Elizabethkingia sp. 2-6: FCS00_19475
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Entry
FCS00_19475 CDS
T06039
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
elz
Elizabethkingia sp. 2-6
Brite
KEGG Orthology (KO) [BR:
elz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
elz03400
]
FCS00_19475
DNA repair and recombination proteins [BR:
elz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
FCS00_19475
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
DUF559
V-ATPase_G
DsrC
Motif
Other DBs
NCBI-ProteinID:
QCO48435
UniProt:
A0ABD6YUZ2
LinkDB
All DBs
Position
complement(4237563..4237973)
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AA seq
136 aa
AA seq
DB search
MDVHTPEQRSKNMRAIKATGTKDEIRLAKALWHSGYRYRKNDKTVFGKPDLVLKKYKVAI
FVDSEFFHGKDWNIEKFRIKSNQEFWHKKIERNIERDKEVNQYLTDNGWKIIRFWSTEVK
KHLQDCIDKIISIIEK
NT seq
411 nt
NT seq
+upstream
nt +downstream
nt
atggatgtccatactcctgagcaacgctcaaaaaacatgcgggctattaaagcaacaggt
actaaagatgaaattcgtttggcaaaagcattgtggcattcaggatatagataccgtaaa
aatgataaaacagtttttggtaaacccgatcttgtattaaaaaaatataaggtagctatt
tttgtagatagtgaattttttcatggcaaagattggaatatagagaagttcagaataaaa
tctaatcaggaattttggcataaaaaaatagaacgcaatattgagcgggataaagaagta
aaccaatatctcacggataatggttggaaaataatacggttctggagtacagaagtaaaa
aaacatctccaggattgtattgataaaataataagtattatagaaaaatga
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