Elizabethkingia sp. 2-6: FCS00_19740
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Entry
FCS00_19740 CDS
T06039
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
elz
Elizabethkingia sp. 2-6
Brite
KEGG Orthology (KO) [BR:
elz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
elz03400
]
FCS00_19740
Enzymes [BR:
elz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FCS00_19740
DNA repair and recombination proteins [BR:
elz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
FCS00_19740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QCO48486
LinkDB
All DBs
Position
complement(4296817..4299552)
Genome browser
AA seq
911 aa
AA seq
DB search
MSETTQHSFLNKIVDSLLQKDKPLHAYTFILPGKRPAVFIKKILAEKQYEGILPKFQTID
ELITEISGLQQISGIPLWLFAYKTYRKIDAKEDIQSFLKWFPTLLKDWDDMLKFSKSDTP
VLEFMLSDERIKNWGELLGEDKPHRRNLNFWQKMNSFLPLLKKELLQENLATPGIIHEKV
KETVSHFAETTKLQLVFCGFNAFTPVEEKLVRNLLQWDKALCFFQADEYYIKDRRQEAGK
FLREHQHWKEFNEYRPFSWIENHFSENKNIQVFEVSGNIAQTKLLPHILDDLRKRNPELS
NTAVVLLDENLLPPTLESLQHLVKSLNITMGFPLKNLSFSVAMKKLFYLQKQLDKNSSSY
YYADLVPLLEELPYKTEDESIIKGFLEQLEERNLVYISRKLFNELLGGISYINLLTKPND
PKVYLDTLIDFCISCKFEKINDIDYENISSFEKAFISLKNQLQQYDFLVDIITLEVLVNQ
LVSTETIDFEGEPLSGLQLMGLLETRLLNFENVIMLSINEGKLPLGRTQNTYLPFDVRRN
FGMNTFLENDSIYAYHFYRLIQEAENVYMLFNGLTSGVNIGEKSRFITQIEMESQHQIQN
YVVDSSSEPVNQEPIRIKKTPLVLEKLELWKQKVSPSHLNAYLYNPLDFYLNQILSTRLP
DELEEEISVRNFGNLVHYTLDYLYQSLLNRKLTATDLKQAQSKVEESLDYIIVEKLKHSP
DYYKRGMNYIHKSVAKRTLQNIIQKDLDDVEQGNSLEILALEHNIHADFYLDDQQQDKIS
FNGFADRIDRFNGTLRIIDYKSAKAGDLNVKSNPKKDEDTQLFDKKYKQEVQLSIYAHCA
LTSGAFPDQEVQCGIWSFVAPDEGPKMLNISGDSYISKSDLELPMKSVRSIILDILNPEK
DFVEEDSTGWG
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaactacccaacatagttttctaaacaaaattgttgacagcctccttcagaag
gataaacctctccatgcctatacctttatacttccgggtaaacgtccggcagtctttatc
aaaaagattctggcagagaaacaatacgaaggaatactgccgaaatttcagactattgac
gaactaattacagaaatatccggactacaacagatctcgggtattcctttatggcttttc
gcttacaaaacctatcgtaaaattgatgcgaaagaggacatacagtccttcttgaaatgg
ttcccaacacttttaaaagattgggatgatatgctgaaattttctaaaagtgatactccg
gttctggaatttatgctttcagacgaacgtattaagaactggggcgaattgcttggtgaa
gataagccacaccgacgcaatctgaacttctggcagaaaatgaactcctttcttccgctg
ttgaaaaaagaattgcttcaggaaaatctggcaactcccggaatcattcatgaaaaggta
aaagaaactgtaagccactttgctgaaactacaaaactgcagttagtattctgtggtttt
aatgcttttacacctgtagaagaaaaactggtcagaaatctcctgcaatgggataaggct
ttatgctttttccaggcagacgaatattatatcaaagacagacgccaggaagccggaaaa
tttctgcgcgaacatcagcattggaaagagtttaatgaatacagacctttcagctggata
gaaaatcatttttcggaaaataaaaacattcaggtattcgaagtttccggaaatattgcg
cagacaaaacttcttccgcatattctggatgatcttcggaaacgaaatcctgaactaagt
aatactgcagttgttcttctggacgaaaacctgttgccaccaacactggaaagtctccag
catctggtaaagagtctgaatattacaatgggattcccactgaagaatttgtcattcagc
gtggctatgaaaaagcttttttatctgcaaaaacagttggataaaaacagctcatcttat
tattacgcagatcttgttccactgttagaggaattaccatacaagacagaagatgagtct
attataaaaggctttctggagcagctcgaagaaaggaacctggtttatatttccagaaaa
ctgtttaatgagcttttaggaggtatatcatatattaatttactgactaaaccaaatgat
ccaaaagtctatctggatacacttatcgacttttgcatctcatgcaagtttgaaaagata
aacgatatagattatgaaaatatatcgagcttcgaaaaggcttttataagtcttaaaaat
cagttacaacaatatgacttccttgtagatatcattactctggaagtattggtaaaccaa
ctcgtaagtaccgaaaccatagattttgaaggggagcctctttcgggattacagctgatg
gggcttttggaaacccgtttgctgaattttgaaaatgtcattatgctttctataaacgaa
ggtaaactgccattagggagaacccagaatacttacctgcctttcgatgtccgtcgtaat
ttcggaatgaacacttttctggaaaacgattctatttatgcatatcatttttaccgactt
attcaggaagctgaaaatgtatacatgctttttaatggactcacaagtggggtaaatatt
ggtgagaaaagccgtttcatcacccagatcgaaatggaaagtcaacaccagatacaaaat
tatgttgtagacagctcttctgaacctgtgaatcaggaaccgatacgcatcaagaaaaca
ccattggtattggaaaagctggaactttggaaacagaaagtttcaccttcgcatctcaat
gcctatctctataatccattggacttctacctgaatcagattctgagcacaagacttccg
gatgaactggaagaagagatatcggttcgtaactttggtaatcttgtacactatacactg
gactatctttaccaaagcttgctgaacagaaaactgacagcaacagatcttaagcaggca
caaagtaaagtagaggaatcactggactatattatcgtagaaaaactaaaacattccccg
gattattataaacgcggaatgaattacattcataaatcggtagccaaaagaacacttcag
aatatcattcagaaagatctggacgatgttgagcaaggaaactcattggaaattctggca
ctggaacataatattcatgctgatttttatctggatgaccagcagcaggataaaataagc
tttaatggttttgccgacaggatagaccgtttcaacggaacacttcgtattatcgactat
aaaagtgccaaggcgggcgaccttaatgtaaagtctaatcctaaaaaggatgaagacacg
cagttatttgataaaaaatataaacaagaagtgcagctatctatctatgcacattgtgcc
ttgacttccggagcttttccggatcaggaagtacaatgtggtatatggagctttgtggca
cctgatgagggacccaaaatgctaaatatatccggagacagctatattagtaaatcagat
ctcgaactaccaatgaaatcagtaaggtctattatactggatattctgaacccggagaag
gactttgttgaagaggacagcacaggctggggctaa
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