Elizabethkingia sp. 2-6: FCS00_20085
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Entry
FCS00_20085 CDS
T06039
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
elz
Elizabethkingia sp. 2-6
Brite
KEGG Orthology (KO) [BR:
elz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
elz03016
]
FCS00_20085 (truB)
Enzymes [BR:
elz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FCS00_20085 (truB)
Transfer RNA biogenesis [BR:
elz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FCS00_20085 (truB)
Prokaryotic type
FCS00_20085 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Saf-Nte_pilin
Motif
Other DBs
NCBI-ProteinID:
QCO48552
LinkDB
All DBs
Position
complement(4369912..4370619)
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AA seq
235 aa
AA seq
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MKFTAEDIQAGQILLVDKPLDWTSFNAVNKIKWKLKREFNLKKVKIGHAGTLDPRATGLL
VICTGKATKQIPQIQDASKEYWAEIKIGVQTESYDTEKPEILPQDISGITEANIHDALKK
FLGEIDQKPPIFSALKVDGKRAYDLARAGQEVDIKVRKTTIHYIDRVEINLPYISFYVGC
SKGTYIRSLAHDIGQELGVGAYLTQLRRTKIGEYTIENATADYLENEYRFGDTEE
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttacagcagaagacatacaggcaggacagatattattagtagacaaaccattg
gactggacgtcctttaatgctgtgaataaaataaaatggaagctaaagcgtgaatttaac
ctgaaaaaggtaaaaattggacatgcaggtactcttgatccaagagcaaccggattattg
gttatatgtaccggaaaagcaacaaaacagattccgcaaatccaggatgcttctaaagag
tattgggctgaaataaagattggtgtacaaacggaatcttacgatactgagaaaccggaa
attctgcctcaagacatttcgggaatcacagaagcaaatatccatgatgctttaaaaaaa
ttccttggtgaaatcgatcagaaaccacctattttctcagctttgaaagttgatggtaaa
agagcctatgatcttgcacgtgcgggtcaggaagtagatataaaggtcagaaaaactact
attcattatatagacagagtagagatcaatttgccttatatttctttttatgttggatgt
tccaaaggtacttatattcgttctttggcgcatgatatagggcaggagcttggcgttggt
gcatatttaacacagcttcgcagaactaaaataggtgaatatactatagaaaatgctact
gctgattatttagaaaacgaatacagattcggggatacagaggaataa
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