Escherichia marmotae: C1192_00275
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Entry
C1192_00275 CDS
T05353
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ema
Escherichia marmotae
Brite
KEGG Orthology (KO) [BR:
ema00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ema03016
]
C1192_00275
Enzymes [BR:
ema01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
C1192_00275
Transfer RNA biogenesis [BR:
ema03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
C1192_00275
Prokaryotic type
C1192_00275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AUT25727
LinkDB
All DBs
Position
43748..44560
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AA seq
270 aa
AA seq
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MSDQQQPPVYKIALGIEYDGSRYYGWQRQNEVRSVQEKLEKALSQVANEPITVFCAGRTD
AGVHGTGQVVHFETTALRKDAAWTLGVNANLPGDIAVRWVKAVPDDFHARFSATARRYRY
IIYNHRLRPAVLSKGVTHFYEPLDAERMHRAAQCLLGENDFTSFRAVQCQSRTPWRNVMH
INVTRHGPYVVVDIKANAFVHHMVRNIVGSLMEVGAHNQPESWIAELLAAKDRTQAAATA
KAEGLYLVAVDYPDRFDLPKPPMGPLFLAD
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaccagcaacaaccgccagtttataaaattgcgctgggtattgagtacgacggc
agcagatattacggctggcaacggcagaatgaagtccgcagtgtgcaggaaaagctggaa
aaggcgctctcgcaggtagcgaacgaacccatcaccgtgttctgtgccgggcgaaccgac
gcaggggtacacggcaccgggcaggtagtgcattttgaaaccaccgcgttacgcaaagac
gctgcgtggacgttaggcgtaaatgcgaatttacctggtgacatcgccgtgcgttgggtt
aaagctgtacccgatgattttcacgcccgatttagcgctacggctcgccgttatcgctac
atcatctacaatcatcgactgcgtccggcggtactgagtaaaggtgttacccacttttac
gaaccgctggatgccgaacggatgcatcgggcggcacaatgcctgttgggcgagaatgat
ttcacctcgttccgcgcggtgcagtgtcagtcccgaacgccgtggcgtaacgttatgcat
atcaacgtcacgcgtcacggtccctatgtggtggtagatatcaaagcgaatgcctttgta
catcatatggtgaggaatattgtcggcagcctgatggaagtgggtgcccacaaccagccg
gagagctggatagcagagctgttggcggctaaggacaggacgcaggcggcagcaacggcg
aaagcggaagggttgtatctggtcgcggtggattacccggacagattcgatcttccaaag
ccgccaatgggcccgctctttctggcggactaa
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