Escherichia marmotae: C1192_01960
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Entry
C1192_01960 CDS
T05353
Symbol
pocR
Name
(GenBank) regulatory protein PocR
KO
K27259
AraC family transcriptional regulator, pdu and cob operon regulator
Organism
ema
Escherichia marmotae
Brite
KEGG Orthology (KO) [BR:
ema00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ema03000
]
C1192_01960 (pocR)
Transcription factors [BR:
ema03000
]
Prokaryotic type
Helix-turn-helix
AraC family
C1192_01960 (pocR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PocR
HTH_AraC
HTH_18
Creatininase
Motif
Other DBs
NCBI-ProteinID:
AUT26043
UniProt:
A0A7L5X783
LinkDB
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Position
409102..410016
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AA seq
304 aa
AA seq
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MISAATLNSELINKIAQDFAQATSLAVVVVNIHGDEISELFNFTSFCQMMRRHPQLSTRC
RMSDRCGGLEASKSDQPCIYRCHAGLTDFSIPLVIAGHLVGFVLCGQVRLRNDDVDLVDI
LNVDDCWQADPELLNEFRKVPEMDYSRVMASADLLKLIVENCLKKQLNFVVIKENKPYSD
PLRQTRTPNPHDNKMKKALRYIDAHLSDDLRLEDVASHVYLSPYYFSKLFKKYHGIGFNA
WVNQQRMASARELLCHSDWSIASIARNLGFSQTSYFCKVFRQTYQVTPQVYRQQISENTA
AETA
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgatttctgcggcgacacttaattcagaactcattaataaaatcgcgcaggattttgcg
caggcgaccagccttgcggttgtcgtggttaatatccacggtgatgaaatttccgagctg
tttaacttcacctcattttgtcagatgatgcggcgacatcctcagcttagcacacgctgc
cgcatgagcgatcgttgtggggggctggaagcctctaaatccgatcaaccttgtatttat
cgttgccatgcaggattaaccgatttttctatccctctggtgattgccgggcatttagtc
ggctttgtattgtgtggacaagtccgcctgcgtaatgatgatgtcgatttagtcgatatt
ctgaatgtcgatgattgttggcaggcagatcccgagttacttaatgaatttcgcaaagtc
ccggagatggattactcgcgagttatggcttctgctgatctgttgaagttaattgtggaa
aactgcctcaaaaaacaactcaattttgttgttattaaagagaataaaccttattcggat
ccgctacgtcagactcgcacgcctaatccccacgataacaaaatgaaaaaagcattacgc
tatattgatgcgcatttatcagacgatttgcgcctggaagatgttgcctcccatgtttat
ctcagcccttattacttcagtaaattgttcaagaaatatcatgggattggttttaatgcg
tgggtaaaccaacaacggatggccagcgcccgcgagttgctgtgccatagtgactggagc
atcgccagcattgcgcgtaatttaggcttttcgcaaaccagttatttttgcaaagttttt
cgtcagacgtatcaggtaacaccgcaggtatatcgtcagcaaattagcgaaaatacagca
gcggaaacagcataa
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