Escherichia marmotae: C1192_02330
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Entry
C1192_02330 CDS
T05353
Symbol
uvrC
Name
(GenBank) excinuclease ABC subunit UvrC
KO
K03703
excinuclease ABC subunit C
Organism
ema
Escherichia marmotae
Pathway
ema03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ema00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C1192_02330 (uvrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ema03400
]
C1192_02330 (uvrC)
DNA repair and recombination proteins [BR:
ema03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C1192_02330 (uvrC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
UvrC_RNaseH
HHH
GIY-YIG
UVR
HHH_5
HHH_3
HHH_2
DUF7508
Motif
Other DBs
NCBI-ProteinID:
AUT26097
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Position
467149..468981
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AA seq
610 aa
AA seq
DB search
MSVQFDAKAFLKTVTSQPGVYRMYDAGGTVIYVGKAKDLKKRLSSYFRSNLASRKTEALV
AQIQQIDVTVTHTETEALLLEHNYIKLYQPRYNVLLRDDKSYPFIFLSGDTHPRLAMHRG
AKHAKGEYFGPFPNGYAVRETLALLQKIFPIRQCENSVYRNRSRPCLQYQIGRCLGPCVE
GLVSEEEYAQQVEYVRLFLSGKDDQVLTQLISRMETASQNLEFEEAARIRDQIQAVRRVT
EKQFVSNTGDDLDVIGVAFDAGMACVHVLFIRQGKVLGSRSYFPKVPGGTELGEVVETFV
GQFYLQGSQMRTLPGEILLDFNLSDKTLLADSLSELAGRKINVQTKPRGDRARYLKLART
NAATALTSKLSQQSTVHQRLSALASVLKLPEVKRMECFDISHTMGEQTVASCVVFDANGP
LRAEYRRYNITGITPGDDYAAMNQVLRRRYGKAIDDSKIPDVILIDGGKGQLAQAKNVFA
ELDVSWDKNHPLLLGVAKGADRKAGLETLFFEPEGEGFSLPPDSPALHVIQHIRDESHNH
AIGGHRKKRAKVKNTSTLETIEGVGPKRRQMLLKYMGGLQGLRNASVEEIAKVPGISQGL
AEKIFWSLKH
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgttcagtttgacgcaaaagcgtttttaaaaaccgtaaccagccagccgggcgtt
tatcgcatgtatgatgctggtggtacggttatttatgtcggcaaagcgaaagacctgaaa
aaacggctttccagttatttccgtagcaacctcgcttcgcgcaaaaccgaagcgttggtc
gcccagatccagcaaatcgatgtcacggttacccacaccgaaacagaagcgttattgctg
gagcacaactacattaaactctatcaaccgcgttacaacgttctgttacgcgatgataaa
tcttatccctttatcttcctgagtggcgatacccatccgcgtctggctatgcatcgcggc
gcgaaacatgccaaaggtgaatatttcggcccgttcccaaacggttatgccgtgcgtgaa
accctggcgctgctacaaaaaattttcccgattcgccagtgtgaaaatagtgtttatcgc
aaccgctcgcgtccgtgtctgcaatatcagatagggcgttgtctggggccgtgcgttgaa
gggctggtgagtgaagaagaatacgcccagcaggtagagtatgtgcgcctgtttttatcc
ggcaaggacgatcaggtgcttacccaactgattagccgcatggaaacagccagccagaat
ctggaatttgaagaggctgcacgtattcgcgaccaaatccaggcggtgcggcgcgtaacc
gaaaaacagtttgtctccaatactggtgatgatcttgacgttattggcgtggcgtttgat
gcgggcatggcttgtgtccatgtcctgtttattcgtcagggcaaggtgctcggtagccgt
agttatttcccgaaagtacctggcggtacggaattgggcgaagtggtggaaacttttgtc
ggccagttctatttacagggtagtcagatgcgcactttgccgggtgagatcctgctcgac
tttaatcttagcgataaaacgctgcttgccgattctctttcggaattggcggggagaaag
attaacgttcagaccaaaccacgtggcgatcgggcacgttacctgaagctggcgcgcacc
aatgcggcgactgcgttaaccagcaaactttcgcagcaatctactgttcaccagcgtctg
tctgcgcttgccagcgtgttgaaactgccggaagtgaagcggatggagtgttttgatatc
agccataccatgggcgaacaaacagtcgcttcgtgtgtggtgttcgatgctaacggcccg
ctgcgagcggagtatcgacgctataacattactggtattacgccgggcgatgattatgcg
gcgatgaatcaggtgctgcgtcggcgttacggaaaagctatcgacgacagtaagatcccg
gacgtgatccttatcgacggcggcaaaggacagcttgcgcaggcgaaaaatgttttcgct
gagctggatgtctcatgggataaaaaccatccgctgttacttggggtagcgaaaggggcc
gatcgtaaggctggtctggaaacgctgttcttcgagccggaaggagagggattcagcctg
ccgccagattcacctgcgctgcatgtcatccagcatattcgcgatgaatcacacaatcat
gcgattggcggtcaccgcaaaaaacgggcaaaggtcaaaaataccagcaccctggaaacc
atcgaaggtgtcgggccaaaacgccggcaaatgttgttgaaatatatgggcggtttgcaa
ggtttacgtaacgccagcgtcgaggaaattgcaaaagtgccgggtatttcgcaaggtctg
gcagaaaagatcttctggtcgttgaaacattga
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