Escherichia marmotae: C1192_03305
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Entry
C1192_03305 CDS
T05353
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ema
Escherichia marmotae
Pathway
ema00061
Fatty acid biosynthesis
ema00071
Fatty acid degradation
ema01100
Metabolic pathways
ema01212
Fatty acid metabolism
ema02024
Quorum sensing
ema04146
Peroxisome
Module
ema_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ema00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
C1192_03305
00071 Fatty acid degradation
C1192_03305
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
C1192_03305
09145 Cellular community - prokaryotes
02024 Quorum sensing
C1192_03305
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ema01004
]
C1192_03305
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ema04147
]
C1192_03305
Enzymes [BR:
ema01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
C1192_03305
Lipid biosynthesis proteins [BR:
ema01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
C1192_03305
Exosome [BR:
ema04147
]
Exosomal proteins
Exosomal proteins of breast milk
C1192_03305
Exosomal proteins of breast cancer cells
C1192_03305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Pept_S41_N
AMP-binding_C_2
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AUT26263
LinkDB
All DBs
Position
620002..621687
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AA seq
561 aa
AA seq
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MKKVWLNRYPADVPTEINPDRYQSLVDMFEQSVARYADKPAFVNMGEVMTFRKLEERSRA
FAAYLQQGLGLKKGDRVALMMPNLLQYPVALFGILRAGMIVVNVNPLYTPRELEHQLNDS
GASAIVIVSNFAHTLEKVVDKTAVQHVILTRMGDQLSTAKGTLVNFVVKYIKRLVPKYHL
PDAISFRSALHNGYRMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQVNA
TYGPLLYPGKELVVTALPLYHIFALTINCLLFIELGGQNLLITNPRDIPGLVKELAKYPF
TAITGVNTLFNALLNNKEFQQLDFSSLHLSAGGGMPVQQVVAERWVKLTGQYLLEGYGLT
ECAPLVSVNPYDIDYHSGSIGLPVPSTEAKLVDDDDNEVPPGQPGELCVKGPQVMLGYWQ
RPDTTDEIIKNGWLHTGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPNEIEDVVMQHPGV
QEVAAVGVPSGSSGEAVKIFVVKKDSSLTEESLVTFCRRQLTGYKVPKLVEFRDELPKSN
VGKILRRELRDEARGKVDNKA
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
ttgaagaaggtttggcttaaccgttatcccgcggatgttccgacggagatcaaccctgac
cgttatcaatctctggtagatatgtttgagcaatcggtcgcgcgctatgccgacaagccc
gcgtttgtgaatatgggggaggtgatgaccttccgcaaactggaagagcgcagccgtgcg
ttcgccgcgtatttacaacaagggctggggctgaagaagggcgatcgcgttgcgctgatg
atgcctaacttattgcaatatccggtggcgctgttcggcattttgcgcgccgggatgatc
gtcgtaaacgtcaatccgttatataccccgcgcgagcttgagcatcagctcaacgacagc
ggcgcatctgcgattgtcatcgtgtccaactttgcccataccctggaaaaagtggttgat
aaaaccgctgtccagcacgtgattctgacacgtatgggcgatcagctttctacggcgaaa
gggacgctggttaacttcgttgttaaatacatcaagcgtctggtgccgaaatatcatctg
ccagatgccatttcatttcgtagcgctctgcataatggttaccggatgcagtacgtaaaa
cctgaactggtgccggaagatttagccttcctgcaatacaccggcggcaccactggcgtg
gcgaaaggcgcaatgctgactcaccgcaatatgctggcaaatctggaacaggttaacgcg
acctacgggccgctgttgtatccgggtaaagagctggtggtgacggcattgccgctgtat
cacattttcgcattgaccattaactgcctgctgtttatcgaactgggcgggcagaatctg
cttattactaacccacgtgatattccggggctggtgaaagagctggcgaaatatccgttt
accgcgatcaccggcgttaacacgttgttcaacgcgttgctgaacaataaagaattccag
caactggatttctccagtctgcatctttccgctggtggtgggatgcctgttcagcaagtg
gtggcagaacgctgggtgaaactgaccggacaatatctgctggaaggttatggcctgacc
gagtgtgcaccgctggtcagcgttaacccgtatgatattgattatcatagcggtagcatt
ggtttgccggtgccgtcgaccgaagccaagttggttgatgacgacgataacgaagtaccg
ccgggtcaaccgggtgagctttgtgtcaaagggccgcaggtgatgctgggctactggcag
cgtccggatactaccgatgaaatcatcaaaaatggctggttacacaccggcgacatcgcg
gtgatggatgaagaaggattcctgcgcattgtcgatcgtaaaaaagacatgattctggtt
tctggctttaacgtctaccccaatgagattgaagatgtggtcatgcagcacccaggtgta
caggaagtggcggctgttggcgtaccttccggttccagcggtgaagcggtgaaaatcttc
gtggtgaaaaaagactcgtcactcacggaagaatcactggtgactttttgccgccgtcag
ctcacaggctataaagtaccgaagctggtggagtttcgtgatgagttaccgaaatctaac
gtcggaaaaattttgcgacgagaattacgtgacgaagcgcgcggcaaagtggacaataaa
gcctga
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