Escherichia marmotae: C1192_03550
Help
Entry
C1192_03550 CDS
T05353
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ema
Escherichia marmotae
Pathway
ema03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ema00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C1192_03550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ema03400
]
C1192_03550
Enzymes [BR:
ema01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
C1192_03550
DNA repair and recombination proteins [BR:
ema03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
C1192_03550
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
AUT26307
LinkDB
All DBs
Position
complement(660954..661760)
Genome browser
AA seq
268 aa
AA seq
DB search
MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK
GHYGVALLTKETPIAVRRGFPGDGEEAQRRIIMAEIPSPLGNVTVINGYFPQGESRDHPI
KFPAKAQFYQNLQNYLETELKRDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL
PEEREWMDRLIRWGLVDTFRHANPETADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAEC
CVETGIDYEIRSMEKPSDHAPVWATFRR
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgtctcttttaatatcaacggtctgcgcgccagacctcaccaacttgaagcc
atcgtcgaaaagcaccaaccggatgtgattggtctgcaggagacaaaagttcatgacgat
atgtttccgcttgaagaggtggcaaagctcggctacaacgtgttttatcacgggcagaaa
ggccattatggcgtggcgctgctgaccaaagagacgccgattgctgtgcgtcgcggattc
ccgggcgacggcgaagaggctcaacggcggattattatggcagaaatcccctcgccgctg
ggcaatgtcaccgtgatcaacggctacttcccacagggcgaaagccgcgaccatccaatt
aaattcccggcaaaagcgcagttctaccagaacctgcaaaactatctggaaactgagctt
aagcgcgataatccggtgctgattatgggcgatatgaacatcagccccaccgacctggat
atcggcattggcgaagagaaccgcaaacgctggctgcgtaccggtaaatgctccttcctg
ccggaagaacgcgaatggatggacagactgatccgctgggggctggtagataccttccgt
cacgctaatccggaaacagcagatcgcttttcgtggtttgattaccgctcaaaaggtttt
gacgataaccgaggtctgcgtatcgacctgctgctcgccagccagccgttggcggaatgc
tgcgtagaaaccggcatcgactatgaaatccgcagtatggaaaaaccgtcagatcacgca
cctgtgtgggcgaccttccgccgctaa
DBGET
integrated database retrieval system
