Escherichia marmotae: C1192_05625
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Entry
C1192_05625 CDS
T05353
Name
(GenBank) cyclic di-GMP phosphodiesterase
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
ema
Escherichia marmotae
Pathway
ema02024
Quorum sensing
ema02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
ema00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C1192_05625
02026 Biofilm formation - Escherichia coli
C1192_05625
Enzymes [BR:
ema01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
C1192_05625
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
GGDEF_2
PAS_10
PAS_4
Motif
Other DBs
NCBI-ProteinID:
AUT26650
LinkDB
All DBs
Position
1053735..1055720
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AA seq
661 aa
AA seq
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MKTIRESTTLYNFLGSHNPYWRLSENSDVLRFSATETTEPERTLQLSAEQAARIREMTVI
TSSLMMSLTVDESDLSVHLVGRKINKREWGGNASAWHDTPAVARDLSHGLSFAEQVVSEA
HSAIVILDSRGNIQRFNRLCEEYTGLKEHDVIGQSVFKLFMSRREAAASMRNNRGFFRNG
NAYEVEIWIPTRKGQRLFLFRNKFVHSGSGKNEIYLICSGTDITEERHAQERLRILANTD
SITGLPNRNAMQELIDHAINQVDESKVGVVYLDLDNFKKVNDAYGHLFGDQLLREVSLAI
LSCLEPDQVLARSGGDEFLVLAPNTSQSALEAMASRILTRLRQPFRIGLIEVYTGCSIGI
SLSPQHGPDSAAIIRHADTAMYSAKEGGRGQFCVFSPEMNQRVFEYLWLDTNLRKALEND
QLVIHYQPKITWRGEVRSLEALVRWQSPEHGLIPPLDFISYAEESGLIVPLGRWVILDVV
RQVAKWRDKGINLRVAVNVSARQLADQTIFTDLKQVLQELKFEYCPIDVELTESCLIEND
ELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQTVSQSLV
RAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKR
A
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccattagggagtccacaacgttgtacaactttctcggatcgcacaacccatac
tggcggttgtcggaaaacagtgatgttttgcgtttttccgccaccgaaacaacggaacct
gaacgtactctgcagttatctgccgaacaggctgctcgtatccgggaaatgacggttatc
acctccagcctgatgatgagcctgacagtcgatgagagtgatctttctgttcatctggtg
ggacgaaaaatcaataagcgtgaatggggtggaaacgcgtcagcatggcatgacacaccg
gcggtagctcgtgatttatcacacggactgtcctttgcagaacaagtggtttctgaagcc
cactctgcaatagtgattctggacagtcggggaaatatccagcgttttaaccggttatgt
gaagagtacacggggctgaaagaacacgatgtcatcgggcaaagtgtgtttaaactgttt
atgagtcgtcgtgaagctgcggcatccatgcgcaataaccgtggattttttcgaaacggc
aatgcatatgaggtagaaatctggatacccacgcgtaaaggccagcggctgtttctgttt
cgcaacaaattcgtgcatagcggcagcggcaaaaatgagatctatttaatctgctccggc
accgatatcaccgaagaacgccacgcccaggagcgcttgcgaattctggctaacaccgac
agcattacagggctgccgaatcgtaacgctatgcaggaattaatcgatcacgccattaat
caggtggatgaaagtaaagtcggcgtggtttatctcgatttagacaattttaaaaaagtg
aacgatgcctacgggcatttgtttggcgaccagttgttacgcgaggtttcactggccatt
ttaagctgtcttgagccggatcaggtactggcgcgctctggcggcgatgaatttctggta
ctcgcaccaaacacctcacaaagtgccctggaagcaatggcatcgcggattttgacccgc
ctgcgtcagccttttcgcattggtttaatcgaagtttatactggctgttcgatcggtatt
tcactttcaccgcaacatggcccagacagtgcggcaattattcgccacgccgatacggca
atgtacagtgccaaagaaggcggtcgagggcaattttgcgttttttcaccggaaatgaat
caacgggtatttgaatatctgtggttggataccaacctgcgtaaagcactggaaaacgat
cagttagttattcactatcaaccgaaaatcacctggcgcggtgaagtgcgcagtctggaa
gctctggtgcgctggcagtcgcccgaacacggactaattcccccactggactttatttcc
tatgcggaagagtccggtctgattgtgcctctgggtcgttgggttattcttgacgtcgtt
cgccaggtggcaaaatggcgagataaaggcatcaatcttcgggtggcagtcaatgtctca
gcacgccaactcgctgatcaaactattttcactgacctgaaacaggtactccaggaactt
aaatttgagtattgccctattgatgtcgagctgactgaaagctgcctgattgaaaacgac
gagctggcgctttccgttattcagcaattcagtcaattaggcgcacaggttcacctggat
gatttcggcactggctactcttccctttctcaactggcacgatttcctatcgatgccatt
aaactcgaccaggtttttgtccgtgatattcacaaacaaactgtctcacagtcgctggta
cgggcaattgtcgccgtagctcaggccttgaacctgcaggttattgccgaaggcgtagaa
agcgcaaaagaagatgcttttttaaccaaaaacggcatcaatgagagacaaggattcttg
tttgccaaaccgatgcccgccgtagcgtttgaacgctggtataaacgttatctgaaacgc
gcataa
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