Escherichia marmotae: C1192_07585
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Entry
C1192_07585 CDS
T05353
Name
(GenBank) L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
ema
Escherichia marmotae
Brite
KEGG Orthology (KO) [BR:
ema00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ema01002
]
C1192_07585
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ema01011
]
C1192_07585
Peptidases and inhibitors [BR:
ema01002
]
Cysteine peptidases
Family C82
C1192_07585
Peptidoglycan biosynthesis and degradation proteins [BR:
ema01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
C1192_07585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
DUF4389
Motif
Other DBs
NCBI-ProteinID:
AUT26985
LinkDB
All DBs
Position
complement(1422866..1424698)
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AA seq
610 aa
AA seq
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MLLNMMCGRRLSAISFCLAVTFAPLFSVQADEPEVIPGDSPVAVSEQGDVLPQAQATAIM
AGIQPLPEGAAENARTQIESQLPAGYKPVYLNQLQLLYAARDMQPMWENRDAVKAFQQQL
AEVAIAGFQPQFNKWVELLTDPGVNGLARDVVLSDAMLGYLHFVANIPVKGTRWLYSSKP
YALSTPPLSVINQWQVALNNGQLPTFVAGLAPQHPQYAAMHESLLTLLSDTKPWPQLTGK
ATLRPGQWSNDVPALREILQRTGMLDGGPKIALPGDETPADAVVSPSAVAVETAEKQTKF
LSKPKPTVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQR
LRLLPAELSTGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPW
NVPPTLARKDILPKVRNDPGYLESHGYTVIRGWNSKEAIDPWQVDWSTITASNLPFRFQQ
APGPRNSLGRYKFNMPSSDAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA
GWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYDLPARSSSQ
IVSKAEQLIR
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgttgcttaacatgatgtgtggtcgtcggctttcggcaataagtttttgtctggccgta
acattcgctccactgttcagtgtgcaggctgatgagcctgaagtaatccctggcgacagc
ccggtggctgtcagcgaacagggagatgtactgccgcaagcgcaagcgacggcaattatg
gcggggatccaaccgctaccagagggtgcggcggaaaacgcacgcacacaaatcgaatct
caattacccgcaggttataagccggtttatcttaaccagcttcaactgctgtatgccgca
cgtgatatgcagccgatgtgggaaaaccgtgatgcggttaaagctttccagcagcaactg
gcggaagtggcgattgccggttttcagccgcagtttaataaatgggtagagttactgact
gacccaggcgttaacggtctggcacgtgacgtagtgttgtcggatgcaatgctgggttac
cttcatttcgttgctaacattccggtcaaaggcacgcgctggctatacagcagtaaacct
tatgcactctcaacaccaccgctctcggtcattaaccaatggcaggtggcgctaaataat
ggccaattgccaacgtttgttgcaggactggcaccgcagcatccgcaatatgccgcgatg
catgaatctttactgaccttgctcagtgataccaaaccgtggccacaactaaccggtaaa
gcaacgttgcgtcctggacagtggagtaatgacgtaccagcactgcgcgaaatattgcag
cgcacaggtatgctcgatggtgggccgaaaattgcgctgcctggcgatgaaacacccgct
gatgcagtcgttagcccatctgccgttgccgtcgaaactgcggaaaagcaaacaaagttt
cttagtaaacctaagccaactgtacgtgccgcctacgataatgagcttgttgaagcggtt
aaacgttttcaggcatggcaaggattgggggcagatggtgctattggtccagccacacgt
gattggctcaatgtgacacctgcacagcgtgcaggtgtgttggcgctcaacatccagcgt
ttacgtttgctacctgcggagctttctaccggcatcatggtcaatataccggcctattct
ttggtctattaccagaacggtaatcaggtgctggactcgcgggtgattgtcggccgtcct
gaccgcaaaacaccaatgatgagcagtgccttaaacaatgtggtagtgaatccgccgtgg
aacgtaccgccgacgctggcacgcaaagatattctgccgaaagtgcgtaatgatccgggc
tatctggaaagccatggctatacggtgatacgtggctggaacagcaaagaagcaattgac
ccgtggcaggttgactggtcgacgattaccgcgtcgaatttaccgttccgctttcagcaa
gctccaggcccacgaaattcgctaggacggtataaatttaatatgccgagttcagacgct
atctacttacatgacacgcctaatcacaatctgttcaagcgtgatacgcgtgcgttgagt
tctggctgtgtgagggtgaataaggcatccgatcttgcaaacatgctgttgcaggatgca
ggctggaatgacaagcgtatttccgatgctctgaagcagggagatacccgttacgtcaat
atccgtcagtctatcccggttaatctctactacctgacagcatttgtcggcgcagatggg
cgtactcaatatcgtacagatatttacaattatgatctgcctgcgcgatccagctcgcaa
attgtatcgaaagcggaacaattaatcaggtaa
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