Escherichia marmotae: C1192_07690
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Entry
C1192_07690 CDS
T05353
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase accessory protein YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
ema
Escherichia marmotae
Brite
KEGG Orthology (KO) [BR:
ema00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ema03009
]
C1192_07690
Ribosome biogenesis [BR:
ema03009
]
Prokaryotic type
ribosomal protein modification factors
C1192_07690
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
AUT29882
UniProt:
A0A370V9K2
LinkDB
All DBs
Position
1450544..1452304
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AA seq
586 aa
AA seq
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MTQTFIPGKDAALEDSIARFQQKLSDLGFQIEEASWLNPVPNVWSVHIRDKECALCFTNG
KGATKKAALASALGEYFERLSTNYFFADFWLGETIANGPFVHYPNEKWFPLTENDDVPEG
LLDDRLRAFYDPENELTGSMLIDLQSGNEDRGICGLPFTRQSDNQTVYIPMNIIGNLYVS
NGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPEIPADVLARYPAVVEAIETLEAE
GFPIFAYDGSLGGQYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRSLKDL
DVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDLFKQDADYPFVDWNFSGTTEEEFATLM
AIFNKEGKDVYIADYEHLGVYACRIIVPGMSDIYPAEDLWMANNSMGSHLRETILSLPGS
EWEKEDYLNLIEQLDEEGFDDFTRVRELLGLATGSDNGWYTLRIGELKAMLALAGGDLEQ
ALVWTEWTMEFNSSVFSPERANYYRCLQTLLLLAQEEDRQPLQYLNAFVRMYGADAVEAA
SAAMSGEAAFYGLQPVDNDLHAFAAHQSLLKAYEKLQHAKAAFWTK
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgacacaaacatttatccccggcaaagatgccgctctggaagattccatcgctcgcttc
cagcaaaaactctccgacctcggttttcaaattgaagaagcttcctggctgaatccggtg
cctaacgtctggtctgtacacatccgcgataaagagtgcgcgctatgttttaccaacggt
aaaggcgcaaccaaaaaggcggcgctggcttctgccctcggtgaatatttcgagcgtctc
tctactaactacttttttgctgatttctggctgggcgaaaccatcgccaacggcccgttc
gtgcattatcccaacgaaaaatggttcccactgaccgaaaacgacgatgtgccggaaggc
ctgcttgatgaccgtctgagggcattttacgacccggagaatgaactgaccggcagtatg
ctgattgatctgcaatccggtaatgaagatcgcggtatttgcggcctgccgtttactcgc
cagtccgacaatcaaaccgtttatattccgatgaatattatcggtaacctgtatgtttcc
aacggtatgtccgctggtaatacccgcaacgaagcgcgcgtccagggattatccgaagtt
tttgaacgctatgtgaaaaaccgcatcatcgctgaaagcatcagcctgccagagatcccg
gctgatgtgctggcacgttatccggcggtggttgaagccatcgaaacgctggaagcggaa
ggtttcccaatctttgcttatgatggttcgcttggcggtcagtatccggtgatctgcgtg
gtactgttcaacccggctaacggcacttgctttgcctctttcggcgcacatcctgatttt
ggcgttgcactggaacgtaccgtgactgaactgctgcagggccgcagtttgaaggacctg
gatgtatttactccgccaaccttcgacgatgaagaagtagctgaacataccaacctcgaa
acgcactttattgattccagcggtttgatctcctgggatctgttcaagcaggatgccgat
tatccgtttgtcgactggaatttctccggcaccactgaagaagagttcgccacgctgatg
gctatcttcaataaggaaggtaaagacgtttatattgctgattatgagcatctgggtgtc
tacgcttgccgtattatcgtgccgggcatgtccgatatttatccggcagaagatttgtgg
atggcgaataacagtatgggcagccatttacgagaaacgattctgtcgctgccaggcagt
gaatgggaaaaagaagattacctgaacctcatcgagcaactggatgaagaaggttttgac
gattttacccgcgtacgtgagctgctgggtctggcaacggggtcggacaacggctggtat
accctgcgtatcggtgaactgaaagccatgctggcgctggctggtggcgacctggaacag
gctctggtctggaccgaatggacgatggagtttaactcatcggtgttcagcccggagcgc
gcgaactattatcgctgcctgcaaaccttactgctgcttgctcaggaagaagatcgtcag
ccactgcaatatctgaacgcgtttgttcgcatgtacggtgctgatgcggtagaagctgcc
agcgcagccatgagtggcgaagccgcgttttatggcctgcaaccggtagacaacgatcta
catgcgtttgccgcacatcagtcactgctgaaagcttacgaaaaactgcaacacgccaaa
gcggcattctggacaaaataa
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