Escherichia marmotae: C1192_08135
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Entry
C1192_08135 CDS
T05353
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ema
Escherichia marmotae
Brite
KEGG Orthology (KO) [BR:
ema00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ema03009
]
C1192_08135
Enzymes [BR:
ema01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
C1192_08135
Ribosome biogenesis [BR:
ema03009
]
Prokaryotic type
ribosomal protein modification factors
C1192_08135
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GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
CLP1_P
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
AUT27084
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Position
1558323..1559648
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AA seq
441 aa
AA seq
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MSKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAV
QESLEAIGEALNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP
KHNPFLSLVPEQGVKLTPHHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKR
LVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYP
YPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTL
RSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERW
NRFMQLQQQISAKRLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETNVKP
GDIVRVKVEHADEYDLWGSRV
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagtaactccccagccgaaaatcggctttgtttccctcggctgtccgaaaaac
ctcgtcgattcagagcgcattctgactgaactgcgcactgaaggttatgatgtagtaccg
agctatgacgacgcagatatggtgatcgtcaacacctgcggctttattgacagtgcggtg
caagaatcactggaagccattggcgaagcgttgaatgaaaacggcaaggtaattgtgacc
ggttgtctgggggcgaaagaagatcaaatccgcgaagtccatccaaaagtgctggaaatc
accggccctcatagctacgagcaggttctggaacacgttcatcactacgtgccaaaaccg
aaacacaacccattcctgagcctggtgccggagcaaggtgttaagctgacaccgcatcat
tatgcttatctgaagatttccgaaggctgtaaccatcgttgcaccttctgcattattccg
tctatgcgcggcgatctggtgagccgcccgattggcgaagtgttaagtgaagcgaaacgt
ctggttgatgcgggtgttaaagagattctggtgatctcccaggatacttccgcgtatggt
gttgatgtaaaacaccgcactggcttccacaacggcgaaccggtaaaaaccagcatggtc
agcctgtgcgaacagctatcaaaactggggatctggacgcgcctgcactacgtttaccct
tacccgcatgtggatgacgtcatcccgttgatggcagaaggcaaaattctgccgtatctg
gatattccgttacagcacgccagcccgcgcattctcaaactgatgaagcgtccgggttct
gtagatcgccaactggcgcgcattaaacagtggcgcgaaatttgcccggaactgacactg
cgctcaacctttattgtcggcttccctggcgagacggaagaagatttccagatgctgctc
gatttcctgaaagaagctcgtctggatcgcgttggttgctttaaatacagcccggttgaa
ggtgctgatgccaatgccctgcctgaccaggttccggaagaagtgaaagaagaacgctgg
aaccgcttcatgcaactgcaacagcagatttccgccaagcgtctgcaggagaaggtgggt
cgtgaaattctggtgatcattgacgaagtggacgaagaaggcgcgattggccgcagcatg
gcagatgcaccggaaattgacggcgcggtttatctcaatggtgaaaccaacgttaagccg
ggtgatattgtgcgtgtgaaagtcgaacacgccgatgagtacgatttgtggggtagtcgg
gtttaa
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