Escherichia marmotae: C1192_08430
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Entry
C1192_08430 CDS
T05353
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
ema
Escherichia marmotae
Pathway
ema03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ema00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C1192_08430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ema03400
]
C1192_08430
DNA repair and recombination proteins [BR:
ema03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C1192_08430
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C1192_08430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
SBDS_domain_II
AAA_30
UB2H
IF2_N
AAA_22
DUF4686
Motif
Other DBs
NCBI-ProteinID:
AUT27140
UniProt:
A0A2B7LLF3
LinkDB
All DBs
Position
complement(1622038..1624059)
Genome browser
AA seq
673 aa
AA seq
DB search
MSKPFKLNSAFKPSGDQPEAIRRLKEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPT
MVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVIVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQ
YTRNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQIVSTVPR
FTIYPKTHYVTPRERIVQAMEEIKTELADRRKVLLENNKLLEEQRLTQRTQFDLEMMNEL
GYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGGDVVDQVVRPTGLLD
PIIEVRPVATQVDDLLSEIRLRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNINGKAILYGDKITPSMAKAIGETERRREKQQRYNEEHGITPQGLNKKVVDILALG
QNIAKTKAKGRGKSRPIVEPDNVPMDMSPKALQQKIHELEGQMMKHAQNLEFEEAAQIRD
QLHQLRELFIAAS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaccattcaaactgaattccgcgttcaaaccttctggcgatcagccggaggcg
attcgccgcctcaaagaggggctggaggatggcctcgcgcaccagactctgctcggtgtg
acggggtcggggaaaaccttcaccattgctaatgtcattgctgatctgcaacgcccaacg
atggtgctggcacccaacaaaacgctggcagcgcaactttatggtgagatgaaagaattc
ttcccggaaaacgcggtggaatacttcgtctcctactacgactactatcagccggaagcc
tacgtaccaagctctgatacgtttattgagaaagatgcctcggtaaacgaacatattgaa
cagatgcgtctttcagcaaccaaagcgttgctggagcggcgggatgttattgttgttgcg
tcagtttccgctatttatggtctgggtgatcctgatttatatctcaaaatgatgctgcac
ctcacggtcggcatgattatcgaccaacgtgcgatcctgcgtcgcctggcggagttgcaa
tatacccgcaatgaccaggcattccagcgcgggaccttccgcgtgcgtggtgaagtgatc
gacattttcccggcggagtccgacgacattgcgctacgcgtggagctgtttgatgaagaa
gttgaacgattgtcgttgtttgatccattaaccgggcaaatcgtttcaacagtcccacgt
tttaccatctacccgaaaacgcactatgttacgccgcgtgaacgcattgtgcaggcgatg
gaagagatcaaaacagaactggcggaccgacgcaaagtgctgctggaaaacaataaactt
ttggaagagcagcgtctgactcaacgaacccagtttgatctggagatgatgaatgagctg
ggctactgttcggggattgaaaactattcgcgctttctctccgggcgtggacctggcgaa
ccaccgccgacgttatttgattacctgcctgccgatggtctgctggtggtcgatgaatct
cacgtcaccattccacaaattggcggaatgtatcgcggtgacagggcgcgtaaagagact
ctggtggagtatggtttccgattgccatcggcgctggataaccgtccgctgaaatttgag
gagtttgaagcgctggctccgcaaacgatttatgtttctgcgactccaggtaattacgaa
ctggagaaatccggtggtgacgtggtggatcaggtggtgcgcccgactggcttgctcgat
ccgattatcgaagtgcgtccggtagcgacccaggtcgatgatcttctttcggagattcgc
ctgcgtgcggcaattaacgaacgcgttctggtgacgacgttgaccaagcgaatggcggaa
gatctaacggaatatctggaagaacacggtgagcgcgtgcgttatcttcactccgacatt
gataccgttgagcgtatggagattatccgcgacttgcgtctgggcgagttcgacgtactg
gtggggatcaacttactgcgtgaaggtctggatatgccggaggtctcattggtggcgatc
ctcgatgctgacaaagaagggttcctgcgttcagaacgttcgctgatccagaccattggc
cgtgcggcgcgtaacatcaacggcaaagcgattctctacggtgataagataaccccgtcg
atggcgaaagcgattggcgaaacggaacgtcgtcgtgagaaacaacagcggtacaacgaa
gagcatggtattacgccacaaggtcttaataaaaaagtggtcgatatcctggcgctgggg
cagaacattgccaaaaccaaagcgaagggcagagggaaatcgcgcccgattgttgagccg
gataatgtgccgatggatatgtcgccaaaagcgttgcagcagaaaatccatgagctggaa
gggcagatgatgaaacatgcgcaaaacctcgaattcgaagaggcggcgcaaatccgtgac
cagttgcatcagttgcgtgagctgtttattgccgcgtcgtga
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