Escherichia marmotae: C1192_13030
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Entry
C1192_13030 CDS
T05353
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
ema
Escherichia marmotae
Brite
KEGG Orthology (KO) [BR:
ema00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ema03400
]
C1192_13030
DNA repair and recombination proteins [BR:
ema03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
C1192_13030
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
DUF7125
RecA_N
Rad51
GvpD_P-loop
AAA_22
SLFN-g3_helicase
nSTAND_NTPase5
ABC_tran
AAA_14
AAA_16
nSTAND3
AAA
AAA_24
NTPase_1
cobW
Zeta_toxin
Zn_ribbon_Thio2
DZR
AAA_29
Viral_helicase1
AAA_5
Herpes_Helicase
PAXNEB
Motif
Other DBs
NCBI-ProteinID:
AUT27929
LinkDB
All DBs
Position
complement(2534740..2536122)
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AA seq
460 aa
AA seq
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MAKAPKRAFVCNECGADYPRWQGQCSACHAWNTITEVRLAASPTVARNERLSGYAGSAGV
AKVQKLSDISLEELPRFSTGFKEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTLCKLA
QQMKTLYVTGEESLQQVAMRAHRLGLPTDNLNMLSETSIEQICLIAEEEQPKLMVIDSIQ
VMHMADVQSSPGSVAQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLEHCIDCS
VLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREVSNPSAIFLSRGDEVTSGSSV
MVVWEGTRPLLVEIQALVDHSMMANPRRVAVGLEQNRLAILLAVLHRHGGLQMADQDVFV
NVVGGVKVTETSADLALLLAMVSSLRDRPLPQDLVVFGEVGLAGEIRPVPSGQERISEAA
KHGFRRAIVPAANVPKKVPEGMQIFGVKKLSDALRVFDDL
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaagctccaaaacgcgcctttgtttgtaatgaatgcggggccgattatccgcgc
tggcaggggcagtgcagtgcctgtcatgcctggaacaccatcaccgaggtgcgtcttgct
gcgtcgccaacggtggcgcgtaacgagcgtctcagtggctatgccggtagcgccggggtg
gcaaaggtccagaaactctccgatatcagccttgaagagctgccgcgtttttcaaccgga
tttaaagagtttgaccgcgtattaggcggcggcgtggtgccgggaagcgccattctgatt
ggcggtaacccaggtgccgggaaatccacgctgttgctgcaaacgctgtgcaaactggcc
cagcagatgaaaacgctgtatgtcaccggcgaagagtcgctgcaacaggtggcaatgcgc
gctcatcgccttggcctgccgactgacaatctcaatatgttgtcggaaaccagcatcgag
cagatctgcctgattgccgaagaagagcaaccgaagctgatggtaattgactccatccag
gtgatgcatatggcggatgtacagtcatcgcctggcagcgtggcgcaggtgcgtgaaacg
gcagcttacctgacgcgcttcgccaaaacgcgcggggtggcaatcgtcatggttggtcac
gtaaccaaagatggttcgctggctggccctaaagtgctggaacactgtattgactgttcg
gtgctgctggacggcgatgctgattcccgttttcgcaccttacgcagccataaaaaccgc
ttcggcgcggtaaatgagctgggcgtattcgcgatgactgaacaggggctacgcgaagtc
agcaacccttcagcaatcttcttaagtcgtggcgatgaagtgacgtccggcagttcagtg
atggttgtgtgggaaggaacgcgtccgctgctggtggagattcaggcgctggtcgatcac
tcgatgatggcgaatccacgccgcgtggcggtggggctggaacaaaaccgtctggcaatc
ctgctggcggtgctgcaccgtcacggtggtctgcaaatggccgatcaggatgtgtttgta
aacgtggtcggcggcgtgaaggtgactgaaaccagcgccgacttagcgttactgctggcg
atggtttccagcctgcgtgacagaccgctgccgcaggatctggttgtgtttggtgaagtt
gggctggcaggagagatccgcccggtgcccagcggtcaggagcgaatttcagaagcggcg
aaacacggctttcggcgggcgattgtaccggcggccaacgtaccgaaaaaagtgccggaa
gggatgcagatttttggcgttaaaaaactctccgacgcgcttagagtgttcgacgactta
taa
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