Escherichia marmotae: C1192_13565
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Entry
C1192_13565 CDS
T05353
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ema
Escherichia marmotae
Brite
KEGG Orthology (KO) [BR:
ema00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ema03016
]
C1192_13565
Enzymes [BR:
ema01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
C1192_13565
Transfer RNA biogenesis [BR:
ema03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
C1192_13565
Prokaryotic type
C1192_13565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AUT28016
UniProt:
A0A2B7LH25
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All DBs
Position
complement(2634616..2635560)
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDINGVLLLDKPQGMSSNDALQKVKRIYNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIARLGQRTDTSDADGQIVEERPVTFSAEQLAAALDSFRGDIE
QIPSMYSALKYQGKKLYEYARQGIEVPREARPITVYELLFIRHEGNELELEIHCSKGTYI
RTIIDDLGEKLGCGAHVIYLRRLAVSKYPVERMVTLEHLRELVEQAEQQGISAAQLLDPL
LMPMDSPASDYPVVNLPLTSSVYFKNGNPVRTSGAPLEGLVRVTEGENGKFIGMGEIDDE
GRVAPRRLVVEYPA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgtcgtcgcggccgcgacattaacggcgttttgttgctggataaaccg
cagggtatgtccagcaacgatgcgttgcaaaaagtgaaacgcatttataacgccaatcgt
gctggacataccggcgcgctggacccgctggcgaccggcatgttgccgatttgtctcggg
gaagcgacgaagttttcccagtacctgctggactctgataaacgttatcgggtgattgcg
cgtcttggacagcgtactgatacttctgacgcagacggacaaatcgttgaggagcgcccg
gtaacctttagtgcagagcaactggcggcggcactcgattcattccgtggcgatattgaa
caaatcccttcgatgtattctgcgctgaaatatcagggtaaaaaactgtacgagtacgcg
cgtcagggcattgaagtgcctcgtgaagcacgaccgattaccgtttatgagttgctgttt
attcgtcacgaaggcaatgaactggagctggaaattcattgctcaaaaggcacctatatc
cgcaccatcattgatgacctgggtgaaaaacttggctgtggcgcacatgtgatttatctg
cgccgtctggctgtaagcaaatatccggttgaacgaatggtgactctggaacatctgcgt
gaacttgtcgagcaagccgaacagcagggtatttcggcggcacaattacttgatccatta
ctgatgccaatggacagtccagcttcggactacccggtggtgaatcttccgctaacgtct
tctgtttacttcaaaaatggtaacccggttcgtacatccggtgcgccactggaaggactg
gttcgtgttacagaaggtgaaaacggtaagtttatcggtatgggcgaaattgacgatgaa
ggccgcgttgcgcctcgtcgcctggtggttgaatacccggcgtaa
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