Escherichia marmotae: C1192_14975
Help
Entry
C1192_14975 CDS
T05353
Name
(GenBank) sigma 54-dependent transcriptional regulator
KO
K14414
transcriptional regulatory protein RtcR
Organism
ema
Escherichia marmotae
Brite
KEGG Orthology (KO) [BR:
ema00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ema03000
]
C1192_14975
Transcription factors [BR:
ema03000
]
Prokaryotic type
Other transcription factors
Others
C1192_14975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA_5
AAA
Mg_chelatase
AAA_16
NACHT
AAA_22
AAA_30
AAA_7
AAA_33
AAA_19
AAA_14
AAA_2
T2SSE
ATPase_2
TsaE
Dockerin_1
MCM
ResIII
NPHP3_N
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
AUT28266
UniProt:
A0A7W2XRZ4
LinkDB
All DBs
Position
2878758..2880356
Genome browser
AA seq
532 aa
AA seq
DB search
MRKTVAFGFVGTVLDYAGRGSQRWSKWRPTLCLCQQESLVIDRLELLHDARSRSLFETLK
RDIASISPETQVVGVEVELHNPWDFEEVYACLHDFARGYAFQPDKEDYLIHITTGTHVAQ
ICWFLLAEARYLPARLAQTSPPRKKEQPDSAGAVTIIDLDLSRYNAIASRFAEERQQTLD
FLKSGIATRNPHFNRMIEQIEKVAIKSRAPILLNGPTGAGKSFLARRIFELKQARHQFSG
AFVEVNCATLRGDTAMSALFGHVKGAFTGARDAREGLLRSANGGMLFLDEIGELGADEQA
MLLKAIEEKTFYPFGSDRQVSSDFQLIAGTVRDLRQLVAEGRFREDLYARINLWTFTLPG
LRQRQEDIEPNLDYEVERHASLTGDSVRFNTEARRAWLAFATSPQATWRGNFRELSASVT
RMATFANSGRITLEAVEDEIRRLRYNWQESRPSALTTLLGAEVENIDLFDRMQLENVIAI
CRQAKSLSAAGRELFDVSRQGRASVNDADRLRKYLARFGLTWESVLTQHSSS
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaaaacagtggcttttggttttgtcggaaccgtactggattatgccgggcgcggt
agccaacgctggtcgaaatggcggccgacactctgtttatgccagcaagaatcattggtg
attgatcgactggaattattacacgacgcccgctcacgctcgctgtttgaaacgcttaaa
cgcgatatcgccagcatttcaccagaaacgcaggttgtaggtgtagaagtggaactccat
aatccgtgggatttcgaagaggtctacgcctgcctgcatgatttcgcccgtggttacgct
tttcaacctgataaagaagactatttaattcacatcaccactggcacccacgtagcgcaa
atttgctggtttttgctggcagaagcgcgttacctgcccgcccgactggcgcaaacttcc
ccgccgcgcaagaaagaacagccggatagcgcaggcgcagtgacgattatcgatctcgat
ttaagccgttataacgctatcgccagccgctttgccgaagaacgccagcaaacgctcgat
tttcttaagtcaggcatcgccacgcgtaacccacacttcaaccgcatgattgaacagatc
gaaaaagtagcgattaaatcccgcgcgccaatcctgcttaatggcccgaccggcgcgggc
aagtcgtttctggcacgacgcatcttcgaattaaaacaggcacggcatcagtttagcggc
gcgtttgttgaagtgaactgcgccacgctgcgcggtgataccgccatgtcggcgctgttt
ggtcatgtgaaaggtgcgttcaccggcgcgagagacgcgcgggaagggttattacgtagc
gccaacggcggcatgttgtttcttgatgaaattggcgaactgggcgcagatgaacaagcc
atgttgctgaaagccattgaagagaaaactttttatccgtttggcagcgatcgccaggtg
agtagcgattttcagcttatcgccggaacggtgcgcgatttgcgccagttggtcgctgaa
gggagatttcgtgaagacctgtatgcgcggataaatctctggaccttcactctgccagga
ctacgccagcgtcaggaggatattgagcctaacctggattatgaagtggagcgccacgcc
tcactcaccggcgatagcgtgcgttttaacaccgaagcgcggcgcgcatggctggctttt
gcgacatccccccaggcaacatggcgcggtaattttcgcgaactttctgccagtgttacg
cgtatggcgacgtttgccaatagcggacgcatcactctggaagctgtggaagatgagatt
cgccgtctgcgctataactggcaggagagtcgcccttcggcacttacgacgttgctgggc
gcagaggtggagaacatcgatctcttcgaccgaatgcaactggaaaacgtgattgccatt
tgtcgccaggcaaaatcgctttccgccgccggacgtgaactttttgacgtttcgcgccag
ggcagagccagcgttaatgacgcggatcggctacgcaaatacctggcgcgttttggtctg
acgtgggaatcggtactgactcagcacagttccagttga
DBGET
integrated database retrieval system
