Escherichia marmotae: C1192_15235
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Entry
C1192_15235 CDS
T05353
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
ema
Escherichia marmotae
Brite
KEGG Orthology (KO) [BR:
ema00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ema03021
]
C1192_15235 (rpoH)
Transcription machinery [BR:
ema03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C1192_15235 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
HTH_10
UCR_14kD
HTH_25
HTH_3
SANT_DAMP1_like
WASH_WAHD
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
AUT28317
UniProt:
A0A2B7LTB8
LinkDB
All DBs
Position
complement(2934534..2935388)
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AA seq
284 aa
AA seq
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MTDKMQSLALAPVGNLDSYIRAANAWPMLSADEERALAEKLHYHGDLEAAKTLILSHLRF
VVHIARNYAGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVEMVARELGVTSKDVREMESRMAAQDM
TFDMSSDDDSDSQPMAPVLYLQDKSSNFADGIEDDNWEEQAANRLTDAMQGLDERSQDII
RARWLDEDNKSTLQELADRYGVSAERVRQLEKNAMKKLRAAIEA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaaaatgcaaagtttagctttagcccctgttggcaacctggattcctacatc
cgggcagctaacgcgtggccgatgttgtcggctgacgaggagcgggcgctggctgaaaag
ctgcattaccatggcgatctggaagcagctaaaacgctgatcctgtctcacctgcggttt
gttgttcatattgctcgtaattatgcgggctatggcctgccacaggcggatttgattcag
gaaggtaacatcggcctgatgaaagcagtgcgccgtttcaacccggaagtgggtgtgcgc
ctggtctccttcgccgtccactggatcaaagcagagatccacgaatacgttctgcgtaac
tggcgtatcgttaaagttgcgacgaccaaagcacagcgcaaactgttctttaacctgcgt
aaaaccaagcagcgtctgggttggtttaatcaggatgaagtcgaaatggtggctcgcgaa
ctgggcgttaccagcaaagacgtgcgtgagatggaatcgcgtatggcggcacaagacatg
acattcgatatgtcttccgacgacgattccgatagccaaccgatggctccggtgctctat
ctgcaggataaatcatctaactttgccgacggcattgaagatgataactgggaagagcag
gcggcaaaccgtctgaccgacgcgatgcaaggtctggacgaacgtagccaggacatcatc
cgcgcgcgctggcttgacgaagacaacaaatctacgttgcaggaactggctgaccgttac
ggcgtttccgccgagcgtgtgcgtcagcttgaaaagaacgcgatgaaaaaacttcgcgct
gctattgaagcgtaa
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