Escherichia marmotae: C1192_15870
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Entry
C1192_15870 CDS
T05353
Symbol
xylF
Name
(GenBank) D-xylose ABC transporter substrate-binding protein
KO
K10543
D-xylose transport system substrate-binding protein
Organism
ema
Escherichia marmotae
Pathway
ema02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ema00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C1192_15870 (xylF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ema02000
]
C1192_15870 (xylF)
Transporters [BR:
ema02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Xylose transporter
C1192_15870 (xylF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Phage_sheath_1C
Motif
Other DBs
NCBI-ProteinID:
AUT28428
LinkDB
All DBs
Position
3066542..3067534
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AA seq
330 aa
AA seq
DB search
MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFV
QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD
IDFYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGK
IKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVA
ISGQDADLAGVKRIAAGTQTMTVYKPITLLANIAAEIAVELGNGQEPKADTTLNNGLKDV
PSRLLTPIDVNKNNIKDTVIKDGFHKESEL
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataaagaatattttactcaccctttgcacctcactcctgcttacaaacgtcgcg
gcgcacgccaaagaagtcaaaataggaatggcaattgatgatctccgtcttgagcgctgg
caaaaagatcgtgatatctttgtgaaaaaagcggaatctctcggtgcgaaagtattcgtg
caatctgcaaatggcaatgaagaaacccaaatgtcgcagattgaaaacatgattaaccgg
ggcgtcgatgttctcgtcattattccatataacggtcaggtattaagtaacgttgtaaaa
gaagccaaacaagagggtattaaagtattagcttacgatcgcatgattaacgacgcggat
atcgatttttatatttctttcgataacgaaaaagtcggtgaactgcaagcaaaagccctg
gtcgatatcgtcccgcaaggaaattatttcctaatgggcggctccccggtcgataacaac
gccaaactgttccgcgccgggcaaatgaaagtattaaaaccctatgttgattcaggaaaa
attaaagtcgttggcgaccaatgggttgatggctggttaccagaaaatgcgctaaaaatt
atggaaaacgcgctgacagctaacaataacaaaattgatgcagttgtcgcttcaaacgat
gctaccgccggtggggcaattcaggcattaagcgcgcaaggtttatcagggaaagtggct
atttccggccaggatgcggatctcgcgggagttaaacgtattgccgcgggaacgcaaacc
atgacggtgtataaacctattactttgttggcaaatatcgcggcagaaattgccgttgag
ttgggcaatggtcaggaaccgaaagcagatactacgttaaataatggcttgaaagatgtt
ccatcccgcctgctgacacctatcgatgtgaataaaaacaacatcaaggatacggtaatt
aaagacggattccacaaagagagcgagctttaa
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