Escherichia marmotae: C1192_16200
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Entry
C1192_16200 CDS
T05353
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ema
Escherichia marmotae
Pathway
ema03030
DNA replication
ema03410
Base excision repair
ema03420
Nucleotide excision repair
ema03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ema00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C1192_16200
03410 Base excision repair
C1192_16200
03420 Nucleotide excision repair
C1192_16200
03440 Homologous recombination
C1192_16200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ema03032
]
C1192_16200
03400 DNA repair and recombination proteins [BR:
ema03400
]
C1192_16200
Enzymes [BR:
ema01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C1192_16200
DNA replication proteins [BR:
ema03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
C1192_16200
DNA repair and recombination proteins [BR:
ema03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
C1192_16200
NER (nucleotide excision repair)
GGR (global genome repair) factors
C1192_16200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AUT28482
LinkDB
All DBs
Position
complement(3132439..3135225)
Genome browser
AA seq
928 aa
AA seq
DB search
MVQIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLILQYKPTHAAV
VFDAKGKTFRDELFEHYKSHRPPMPDDLRVQIEPLHAMVKAMGLPLLAVSGVEADDVIGT
LAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK
EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWVADVEAGKWLQAK
GAKPATKSQETIVVDEMPEVTATVISYDNYVTILDENTLKEWITKLEKAPVFAFDTETDS
LDNVSANLVGLSFAIELGVAAYVPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQN
LKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLADRWLKHKTITFEEIAGKG
KNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKQKGPLNVFENIEMPLVPVLSRI
ERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLK
KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH
QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRD
KGLLTAFAEGKDIHRATAAEVFGLSLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIP
RKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAE
RAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDLDVVAKKI
HQLMENCTRLDVPLLVEVGSGENWDQAH
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggttcagatcccccaaaacccacttatccttgtagatggttcatcttatctttatcgc
gcatatcacgcgtttccgccgctgaccaacagcgcaggcgagccgaccggtgcgatgtat
ggtgtcctcaacatgctgcgcagtctgatcttgcaatataaaccgacgcatgcagcggtg
gtctttgacgccaagggaaaaacctttcgtgatgaactgtttgaacattacaaatcacat
cgcccgccaatgccggatgatctacgagtgcaaatcgagcctctgcatgcgatggttaaa
gcgatgggcttgccgctgctggccgtttctggcgtagaagcagacgatgttatcggcact
ctggcacgcgaagcagaaaaagccggtcgcccggtactgatcagcaccggtgataaagat
atggcgcaactggtaacgccaaatatcactctcatcaataccatgacgaatacgatcctt
ggcccggaagaggtcgtgaataagtacggtgtaccgccggaactgattatcgacttcctc
gcgctgatgggcgactcttcagataacatccctggcgtaccgggcgtgggtgaaaaaacc
gcgcaggcactgctgcaaggtcttggtgggctggatacgctgtatgctgagccggaaaaa
attgctggcctaagcttccgcggtgcgaaaacaatggcggcgaagctcgagcaaaataaa
gaggtagcatatctttcttaccagttagcgacgattaaaactgatgttgagctggagctg
acctgtgaacaactggaagtgcagcaaccggcggctgaagagttgttagggctgtttaaa
aagtatgaattcaaacgctgggttgccgatgttgaagcaggcaagtggttacaggccaaa
ggggcgaaaccggccacaaagtcgcaggaaaccattgttgtcgacgaaatgccggaagtg
actgcgacggtgatttcttacgacaattacgtcaccatccttgatgaaaatacgctgaaa
gaatggattacgaagctggaaaaagcgccggtatttgcttttgacaccgaaaccgacagc
ctcgataacgtctctgccaacctggtggggctatctttcgccatcgagctaggtgtggcg
gcgtatgtaccggttgctcatgattatctcgatgctcccgaccagatctctcgcgagcgc
gccctcgaactgctgaaaccactgctggaagatgagaaggcgctgaaggttgggcaaaat
ctgaaatacgatcgcggcattctggcgaactacggtattgagctgcgtggaattgccttt
gataccatgctggagtcctacattctcaacagtgttgccgggcgtcacgacatggacagc
ctcgcggaccgttggctgaagcacaaaaccattacttttgaagagattgccggtaaaggt
aaaaatcaactgacttttaaccagattgccctggaagaggccggacgctatgccgccgaa
gatgcggatgtcaccttgcagttgcatctgaaaatgtggccggatctgcaaaaacaaaaa
ggaccgttgaacgtctttgaaaacatcgaaatgcctttggtgccggtgctttcgcgcatt
gaacgtaacggtgtgaagatcgatccgaaagttctgcacaatcattcagaagaactcact
ctgcgtctcgcggagctggaaaagaaagcgcatgaaattgctggtgaagaatttaatctt
tcttccaccaagcagttacaaaccattctgtttgaaaaacaggggattaaaccgctgaag
aaaacaccgggtggtgcgccgtcaacgtcggaagaggtgctggaagagctggcactggac
tatccattgccgaaagtgattctggagtaccgcggtctggcgaagttgaaatcgacttac
accgacaagctgccgctgatgatcaacccgaaaaccgggcgcgtgcatacttcttatcac
caggcggtgactgcgacagggcgcttgtcgtcaaccgatcctaacttgcaaaacattccg
gtgcgtaacgaggaaggtcgccgtatccgtcaggcgtttattgcgccagaggattacgtg
attgtttctgcggactactcgcagattgaactgcgcattatggcgcatctctcacgtgat
aaaggcttgctgaccgccttcgcagaaggaaaagatatccaccgggcaacggctgcagaa
gtgtttggtttgtcactggaaaccgtcaccagcgaacaacgtcgtagcgcgaaagcgatc
aactttggcctgatttacggcatgagtgctttcggtctggcgcgccagttgaacattccg
cgtaaagaagcgcagaagtacatggatctctactttgaacgctatccaggcgtgttggag
tatatggaacgcacccgcgcccaggcgaaagaacagggttacgttgaaacgctggacgga
cgccgcctctatttgccggatattaagtccagcaatggtgcgcgccgtgccgcggcagaa
cgtgcagcaattaacgcgccaatgcagggcaccgcggccgatatcatcaagcgggcgatg
attgccgttgatgcgtggctccaggccgagcaaccgcgtgtgcgtatgattatgcaggta
cacgatgaactggtgtttgaagttcataaagatgatctcgatgtggtagcgaagaaaatc
catcagttgatggaaaactgtacccgtctggatgtgccgttgctggtggaagtgggaagt
ggcgaaaactgggatcaggcgcactaa
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