Escherichia marmotae: C1192_16285
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Entry
C1192_16285 CDS
T05353
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
ema
Escherichia marmotae
Pathway
ema00071
Fatty acid degradation
ema00280
Valine, leucine and isoleucine degradation
ema00310
Lysine degradation
ema00362
Benzoate degradation
ema00380
Tryptophan metabolism
ema00410
beta-Alanine metabolism
ema00640
Propanoate metabolism
ema00650
Butanoate metabolism
ema00907
Pinene, camphor and geraniol degradation
ema00930
Caprolactam degradation
ema01100
Metabolic pathways
ema01110
Biosynthesis of secondary metabolites
ema01120
Microbial metabolism in diverse environments
ema01200
Carbon metabolism
ema01212
Fatty acid metabolism
Module
ema_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
ema00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
C1192_16285 (fadB)
00650 Butanoate metabolism
C1192_16285 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
C1192_16285 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
C1192_16285 (fadB)
00310 Lysine degradation
C1192_16285 (fadB)
00380 Tryptophan metabolism
C1192_16285 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
C1192_16285 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
C1192_16285 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
C1192_16285 (fadB)
00930 Caprolactam degradation
C1192_16285 (fadB)
Enzymes [BR:
ema01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
C1192_16285 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
C1192_16285 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
C1192_16285 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
C1192_16285 (fadB)
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
AUT29952
LinkDB
All DBs
Position
3150956..3153145
Genome browser
AA seq
729 aa
AA seq
DB search
MLYKGDTLYLDWLEDGIAELVFDAPGSVNKLDTATVASLGEAIGVLEQQSDLKGLLLRSN
KATFIVGADITEFLSLFLVPEEQLSQWLHFANSVFNRLEDLPVPTIAAVNGYALGGGCEC
VLATDYRLATPDLRIGLPETKLGIMPGFGGSVRMPRMLGADSALEIIAAGKDVGAEQALK
IGLVDGVVKAEKLLEGAMAILRQAINGDLDWKAKRQPKLEPLKLSKIEATMSFTIAKGMV
AQTAGKHYPAPITAVKTIEAAARFGREEALNLENKSFVPLAHTNEARALVGIFLNDQYVK
GKAKKLTQDVETPKQAAVLGAGIMGGGIAYQSAWKGVPVVMKDINDKSLTLGMTEAAKLL
NKQLERGKIDGLKLAGVISTIHPTLDYAGFDRVDIVVEAVVENPKVKKAVLAETEQKVRP
DTVLASNTSTIPISELANALERPENFCGMHFFNPVHRMPLVEIIRGEKSSDETIAKVVAW
ASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSQLLRDGADFRKIDKVMEKQFGWPMGPAYL
LDVVGIDTAHHAQAVMAAGFPQRMQKDYRDAIDSLFDANRFGQKNCLGFWRYKEDSKGKP
KKEEDSAVDGLLAEVSQPKRDFSEEEIIARMMIPMVNEVVRCLEEGIIATPAEADMALVY
GLGFPPFHGGAFRWLDTLGSAKYLDMAQQYQHLGPLYEVPEGLRNKARHNEPYYPPVEPA
RPVGDLKTA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctttacaaaggcgacaccctgtaccttgactggctggaagatggcattgccgaactg
gtgttcgatgccccaggctcagttaataaactcgacactgcaaccgtcgccagcctcggt
gaggccatcggcgtgctggaacaacaatcagatttaaaagggctgctgctgcgttcgaac
aaagcaacctttatcgtcggtgctgatatcaccgaatttttatcgctgtttctcgttccg
gaagaacagttaagccagtggctgcattttgccaatagcgtgtttaatcgactggaagat
ctgccggtgccgaccattgccgcggtcaacggctacgcgctgggcggtggctgcgaatgc
gtgctggcgaccgattatcgtctggcgacgccggatctgcgtatcgggttgccggaaacc
aaacttggcatcatgccgggctttggcggctccgtgcgtatgccacgaatgctgggcgct
gacagtgcgctggaaatcattgccgccggtaaagatgtcggggccgaacaggcgctgaaa
atcggtctggttgatggcgtagtcaaagcagaaaaactacttgaaggcgcgatggcaatt
ttacgccaggccattaacggcgacctcgactggaaagcgaaacgtcagccgaagctggaa
ccgctgaaacttagcaagattgaagccaccatgagcttcaccatcgctaaagggatggtc
gcacaaacagcggggaaacattacccggcccccatcaccgcagtaaaaaccattgaagcc
gccgcccgttttggtcgtgaagaagccttaaacctagaaaacaaaagctttgttccgctg
gcgcacaccaacgaagcccgcgcactggtcggcattttccttaacgatcaatatgtaaaa
ggcaaagcgaaaaaacttacccaagacgttgaaacaccgaaacaggccgctgtactgggc
gcgggcattatggggggaggcattgcttaccagtccgcgtggaaaggcgtgccggttgtc
atgaaagatatcaacgacaagtcgttaaccctcggcatgaccgaagccgcgaaactgctg
aacaagcagcttgagcgcggcaagatcgatggtctgaaactggctggcgtgatctccacg
attcacccaacgctcgactacgccgggtttgaccgcgtggatattgtggtagaagcggtt
gttgaaaacccgaaagtgaaaaaagccgtgctggcagaaactgagcagaaagtacgtccg
gataccgtgctggcttctaacacttcaaccattcctatcagcgaactggccaacgcgctg
gaacgcccggaaaatttctgcgggatgcacttctttaacccggtgcaccggatgccgttg
gtagaaattattcgcggtgagaaaagctccgacgaaaccatcgcaaaagttgtcgcctgg
gcaagcaagatgggcaagacgccgatcgtagttaacgactgcccgggcttcttcgttaac
cgcgtgctgttcccgtacttcgctggtttcagccagttactacgtgacggcgcggatttc
cgcaagatcgacaaggtgatggaaaaacagtttggctggccgatgggtccggcatacctg
ctggatgtcgtggggattgataccgcgcatcacgcccaggcagtgatggcagcgggcttc
ccgcagcggatgcaaaaagattatcgcgacgccatcgattcattgtttgatgccaaccgc
tttggtcagaagaattgtctcggtttctggcgctataaagaagacagcaaaggcaagccg
aagaaagaagaagattccgccgttgacggcctgctggcagaagtcagccagccaaagcgt
gatttcagcgaggaagagattatcgcccgcatgatgatcccgatggtcaacgaagtggtg
cgctgcctggaagaaggcattatcgccactccggcagaagcggatatggcgctggtctac
ggcctgggcttccctccgttccacggcggcgcgttccgctggctggacaccctcggcagc
gcgaaatatctcgatatggcgcagcaatatcagcacctcggcccactgtatgaagtgccg
gaaggtctgcgtaataaagcgcgccataacgaaccatactatcccccggttgagccagcc
cgtccggttggcgacctgaaaacggcttaa
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