Escherichia marmotae: C1192_16475
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Entry
C1192_16475 CDS
T05353
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ema
Escherichia marmotae
Pathway
ema03420
Nucleotide excision repair
ema03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ema00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C1192_16475
03430 Mismatch repair
C1192_16475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ema03400
]
C1192_16475
Enzymes [BR:
ema01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C1192_16475
DNA repair and recombination proteins [BR:
ema03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C1192_16475
MMR (mismatch excision repair)
Other MMR factors
C1192_16475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
AAA_19
AAA_30
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
AUT28530
LinkDB
All DBs
Position
complement(3190100..3192262)
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSYLLESLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV
TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRAHHIQSYGNPVEQTWQKVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT
GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN
NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS
RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ
TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL
EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMG
TPLADNDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttacctgctcgaaagccttaatgacaaacagcgcgaagcggtggccgcg
ccacgcagcaatcttctggtgctggcgggcgcgggcagtggtaagacgcgcgttctggtg
catcgtattgcgtggctgatgagcgtggaaaactgctcgccgtactcgattatggcggtg
acgtttaccaacaaagcggcggcggaaatgcgccatcgcatcgggcaattgatgggcacc
agccagggcggcatgtgggttggcaccttccacgggctggcgcaccgcctgctgcgtgcg
caccatatggacgctaacctaccgcaggatttccagatcctcgatagcgaagaccaactg
cgcctgctcaagcgtttgatcaaagcgatgaacctcgacgagaagcagtggccgccgcgc
caggcaatgtggtacatcaacagccagaaagacgaaggcctgcgggcgcatcatattcag
agctacggtaacccggtagagcaaacctggcagaaggtttatcaggcgtatcaggaagcg
tgtgaccgcgcgggcctggtggacttcgctgaactgctgctgcgcgcccacgaactgtgg
cttaacaagccgcatatcctgcaacactaccgcgaacgttttaccaatatccttgtggac
gaattccaggataccaacaacattcagtacgcgtggatccgcctgctggcgggggatacc
ggcaaagtgatgatcgtcggtgatgatgaccagtcaatttatggctggcgcggcgcgcag
gtcgagaatattcagcgtttcctcaatgatttcccaggtgccgaaactattcgtctggag
cagaactatcgctccaccagtaacattctgagcgccgccaacgccctgattgaaaacaac
aatggacgcttaggtaaaaaattgtggaccgatggcgcggacggtgagccgatttccctt
tattgtgcctttaacgaactcgacgaagcgcgttttgtggttaaccgcatcaaaacctgg
caggacaatggcggggcgctcgctgagtgcgccattctctaccgtagcaacgcccagtcg
cgtgtgctggaagaggccttattgcaggccagtatgccgtaccgtatttatggcggtatg
cgcttcttcgaacgccaggaaatcaaagatgcgctctcgtatctgcgcctgattgccaac
cgtaacgatgacgcggcatttgagcgcgtggtgaatacgccaacgcggggtattggtgat
cggacgctggacgtagttcgccagacatcgcgcgatcgccagctaactctctggcaggcg
tgtcgtgaactgttacaggaaaaagccctcgctgggcgcgctgccagcgccttgcaacgg
tttatggaactgattgacgccttagcgcaagaaactgccgatatgccgctgcatgtacag
actgaccgggtaattaaagactctggcctgcgtaccatgtatgaacaggagaaaggcgaa
aaaggccagacgcgtattgaaaacttagaggaactggtgacagcaacgcgccagttcagc
tacaacgaagaagatgaagatttaatgccgctgcaggctttcctctcgcatgcggcactg
gaagcgggtgaagggcaggcggatacctggcaggatgcggtgcagttgatgactttgcac
tcagcgaaagggctggagttcccgcaggtatttatcgtcggtatggaagagggaatgttc
cccagccagatgtcgctggatgaaggtgggcgtctggaagaagaacgtcgtctggcctac
gttggggtaacccgtgcgatgcagaaactgacgctgacctatgcggaaactcgccgtctg
tatggcaaagaggtttaccatcgcccgtcgcgctttattggtgagctgccggaagaatgt
gtggaagaggtgcgattacgcgctacggtgagtcgtccggtcagtcatcagcgtatgggt
acgccactggctgataacgacagcggttacaaactcggccagcgtgtgcgccatgccaag
tttggtgaagggactatcgtcaatatggaaggcagcggcgagcatagccgcctgcaggtg
gcgttccagggccagggtattaaatggctggtggcggcttacgcccggctggagacggtg
taa
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