Escherichia marmotae: C1192_16655
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Entry
C1192_16655 CDS
T05353
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ema
Escherichia marmotae
Pathway
ema03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ema00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C1192_16655 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ema03021
]
C1192_16655 (rho)
03019 Messenger RNA biogenesis [BR:
ema03019
]
C1192_16655 (rho)
Transcription machinery [BR:
ema03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
C1192_16655 (rho)
Messenger RNA biogenesis [BR:
ema03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
C1192_16655 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_22
AAA_25
S1CSD-TOTE-2
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
AUT28560
UniProt:
A0A2B7MAS6
LinkDB
All DBs
Position
complement(3224401..3225660)
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
FDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY
NRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDDFFDMMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaagaatacgccggtttctgagctgatcactctcggcgaaaat
atggggctggaaaatctggcccgtatgcgtaagcaggacattatttttgccatcctgaag
cagcacgcaaagagtggcgaagatatctttggtgatggcgtactggagatattgcaggat
ggatttggtttcctccgttccgcagacagctcctacctcgccggtcctgatgacatctac
gtttctcccagccaaatccgccgtttcaacctccgcactggtgataccatctctggtaag
attcgcccgccgaaagaaggtgaacgctattttgcgctgctgaaagttaatgaagttaac
ttcgacaaacctgaaaacgctcgcaacaaaatcctctttgagaacttaaccccgctgcac
gcaaactctcgtctgcgtatggaacgtggtaacggttctactgaagatttgaccgcacgc
gtgctggatctggcttcaccaatcgggcgtggccaacgtggtctgattgtggcaccgcct
aaagcgggtaaaaccatgctgctgcagaacatcgcccagagcattgcttacaaccaccca
gactgtgtgctgatggttctgctgatcgacgaacgtccggaagaagtaaccgagatgcag
cgtctggttaaaggtgaagttgtcgcttctaccttcgacgaaccggcatctcgccacgtt
caggttgcggaaatggtgatcgagaaggcaaaacgcctggttgagcacaagaaagacgtt
atcattctgctcgactccatcacccgtctggcgcgcgcctacaacactgttgttcctgcg
tctggtaaagtgctgaccggtggtgtggatgctaacgcactgcaccgtccgaaacgattc
ttcggtgcggcgcgtaacgtagaagagggcggcagcctgaccatcatcgcgacggcgttg
atcgacaccggttccaaaatggacgaagttatctacgaagagtttaaaggtacaggtaac
atggaactgcacctttctcgtaagatcgcagaaaaacgcgtcttcccggctatcgactac
aaccgttccggtacgcgtaaagaagagttgctcaccactcaggaagagctacagaaaatg
tggatcctgcgcaaaatcattcacccgatgggcgaaatcgatgcaatggaattcctcatt
aataaactggcaatgaccaagaccaatgacgatttcttcgatatgatgaaacgttcataa
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