Escherichia marmotae: C1192_17725
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Entry
C1192_17725 CDS
T05353
Name
(GenBank) HTH-type transcriptional activator RhaS
KO
K02855
AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS
Organism
ema
Escherichia marmotae
Brite
KEGG Orthology (KO) [BR:
ema00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ema03000
]
C1192_17725
Transcription factors [BR:
ema03000
]
Prokaryotic type
Helix-turn-helix
AraC family
C1192_17725
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
AraC_binding
HTH_AraC
Cupin_2
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AUT28748
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Position
3436431..3437267
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AA seq
278 aa
AA seq
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MTVLQSVDFFPSGHASVAIEPRLPQADFPEHHHDFHEIVIVEHGTGIHVFNGQPYTISGG
TICFVRDHDRHLYEHTDNLCLTNVLYRSPDRFQFLAGLHQLLPQELDGQYPSHWRVSQSV
LQQVRQLVSQLEQHERASDLPSKASREILFMQLLLLLRKNSLQESMESRESRLNLLLAWL
EEHFADEVNWETVADKFSLSLRTLHRQLKQQTGLTPQRYLNRLRLVKARHLLRHSEASVT
EIAYRCGFSDSNHFSTLFRREFNWSPRDIRQGRDGFLQ
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtattacaaagtgtggatttttttccgtctggtcacgcgtccgtggcgatagaa
ccccggcttccgcaagctgatttccctgagcatcaccatgattttcatgagattgtgatt
gttgaacatggcacgggtatccacgttttcaatgggcagccttataccatctccggtggc
acaatctgcttcgtgcgcgatcatgatcggcatttatacgaacatacggacaatctgtgt
ttgaccaatgtgctgtatcgctcaccggatcgatttcagtttctcgccgggctgcatcag
cttcttccgcaagagctggacgggcaatatccgtctcactggcgcgtgagccaaagcgta
ttgcagcaggtgcggcaactggtttcgcaactggaacagcatgaaagggcgagtgattta
ccctcgaaagccagtcgcgagattttgtttatgcaattactgctcttgctgcgtaaaaac
agtttgcaggagagtatggaaagtcgtgaatcacgtctgaacttgctcctggcctggctg
gaggagcattttgccgacgaggtgaattgggaaacggtggcggataagttttctctgtca
ctacgcactttgcatcgtcagctaaaacagcaaaccggtttgactccccagcgttacctt
aaccgtttacggttggtgaaggcgcgtcatctgttacgtcatagcgaggccagcgtgacc
gaaatcgcatatcgctgcgggttcagcgacagtaaccacttttcgacgctgtttcgccgt
gagtttaactggtcaccgcgtgatattcgccaggggcgggatggttttctgcaataa
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