Escherichia marmotae: C1192_18635
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Entry
C1192_18635 CDS
T05353
Name
(GenBank) ABC-ATPase UvrA
KO
K03701
excinuclease ABC subunit A
Organism
ema
Escherichia marmotae
Pathway
ema03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ema00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C1192_18635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ema03400
]
C1192_18635
DNA repair and recombination proteins [BR:
ema03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C1192_18635
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C1192_18635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
RsgA_GTPase
DnaJ_CXXCXGXG
AAA_21
AAA_23
AAA_25
NACHT
Viral_helicase1
T2SSE
cobW
ExoX-like_C
Motif
Other DBs
NCBI-ProteinID:
AUT28905
LinkDB
All DBs
Position
complement(3634251..3637073)
Genome browser
AA seq
940 aa
AA seq
DB search
MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLYARVGEPRC
PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID
GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDNP
KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPEL
SLAGGAIRGWDRRNFYYFQMLKSLADHYKFDIEAPWGSLSANVHKVVLYGSGKENIEFKY
MNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH
VYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT
VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV
PKKRVPADPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR
QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE
SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY
KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL
ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADW
IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggataagatcgaagttcggggcgcccgcacccataatctcaaaaatatcaacctcgtt
atcccccgcgacaaactgattgtcgttaccgggctttcgggttctggcaaatcctcgctc
gctttcgacaccttatatgccgaagggcagcgtcgttacgttgaatccctttccgcctac
gcgcggcagtttctatcactgatggaaaagccggatgtcgaccatatcgaggggctttca
cccgccatctcgattgaacagaaatcgacgtcccacaacccgcgctccacggtggggaca
atcaccgaaatccacgactatttgcgtctgctgtacgctcgcgtcggtgagccgcgctgc
ccggatcacgatgtcccgctggcggcgcaaaccgtcagccagatggtagacaacgtcctg
tcgcagccggaaggcaaacgtctgatgctactcgcgccaatcattaaagagcgcaaaggc
gaacacactaaaacgctggagaatctggcgagtcagggttacatccgcgcacgtattgat
ggcgaagtctgcgatctttccgatccgccgaaactggaactgcaaaagaaacacacgatt
gaagtggtagttgatcgtttcaaagtgcgtgacgatcttacccaacgcctggcggagtca
tttgaaacggcgctggagctttccggcggtacggcggtggttgccgatatggacaatccg
aaagcggaagagctgctcttttccgccaacttcgcctgtccgatttgcggctacagtatg
cgcgaactggaaccgcgtctgttttcgttcaacaacccggcgggcgcctgcccgacctgt
gacggcctcggcgttcaacaatatttcgatcctgaccgagtgatccaaaatccggaacta
tcgctggcgggcggcgcgatccgcggctgggatcgccgtaatttttattacttccagatg
ctgaaatcactggcagaccactataagttcgacatcgaagcaccgtggggcagcctgagt
gcgaacgtgcataaagtggtgctttacggttctggcaaggaaaatatcgaattcaaatac
atgaacgatcgtggcgatacgtctatccgccgccatccgttcgaaggcgtgctgcacaat
atggagcgccgttataaagaaacagaatccagcgcggtacgcgaagagttagccaagttt
atcagcaatcgtccgtgcgccagttgtgaagggacgcgtctgcgccgtgaagcacgccac
gtttatgttgagaatacaccgctgcctgccatctctgacatgagcatcggccatgcgatg
gagttcttcaacaatctcaaactcgccgggcaacgcgcgaagattgcggaaaaaatcctt
aaagagattggcgaccgcctgaaattcctcgttaacgtcgggctgaactacctgacactt
tcccgctcggcagaaaccctttccggcggtgaagcccagcgtatccgtctggcaagccag
attggcgcagggctggttggcgtgatgtacgtgctggatgaaccgtctatcggcctgcat
cagcgcgataacgaacgcctgctgggtacgcttatccacctgcgcgatctcggtaatacc
gtgattgtggtggagcacgacgaagacgctattcgcgcggctgaccatgtcatcgacatt
ggcccgggcgcaggtgtacacggtggtgaagtggtcgcggaaggtccgctggaagcgatt
atggcagttccggagtcgttaaccggccagtacatgagcggtaaacgcaaaattgaagtg
ccgaagaaacgcgtacccgcagatccggaaaaagtgctgaaactgacaggcgcgcgcggc
aacaacctgaaagatgtgacactgacgctgccggtaggtctgtttacctgcatcaccggg
gtttcaggttctggtaaatcgacgctgattaacgacacgctgttcccgattgcccaacgc
cagttgaatggcgcaacaattgctgaacctgcaccctatcgcgatattcaggggttggag
catttcgacaaagtcatcgatatcgaccaaagcccaattggtcgtactccgcgttccaac
ccggcgacctataccggcgtgtttacgcctgtacgcgaattgtttgcgggcgtaccggaa
tcccgtgcgcgcggttatacgcctggacggttcagctttaacgtccgtggtgggcgctgc
gaagcctgtcagggcgatggtgtaatcaaagtggaaatgcacttcctgccggatatttac
gtgccgtgcgaccagtgcaaaggtaaacgttataaccgcgaaacgctggagattaagtac
aaaggtaaaaccatccacgaagtgctggatatgaccatcgaagaagcgcgtgagttcttt
gatgctgtgcccgcactggcgcgtaaactgcaaacgctgatggatgttggtctgacgtac
atccgtctcgggcagtccgcaaccacgctttccggtggtgaggcccagcgtgtgaagctg
gcgcgtgaattgtcaaaacgcggcaccgggcagacgctgtatattctcgatgaaccgacc
accggtctgcactttgccgatattcagcaactgctcgacgttctgcataaactgcgcgat
cagggcaataccattgtggtgattgagcacaatctcgacgtgatcaaaaccgctgactgg
attgttgatctggggccagaaggtggcagcggcggcggtgagatcctcgtctccggcacg
ccagaaaccgtcgcagagtgtgaagcatcgcatacagcgcgcttcctcaagccaatgctg
taa
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