Escherichia marmotae: C1192_21625
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Entry
C1192_21625 CDS
T05353
Name
(GenBank) transcriptional regulator
KO
K02430
DeoR family transcriptional regulator, L-fucose operon activator
Organism
ema
Escherichia marmotae
Brite
KEGG Orthology (KO) [BR:
ema00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ema03000
]
C1192_21625
Transcription factors [BR:
ema03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
C1192_21625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
GntR
HTH_Mga
TrmB
HTH_Crp_2
TFIIE_alpha
Mga
HTH_PafC
HTH_36
HTH_69
HTH_AsnC-type
HTH_9
HTH_20
HTH_Tnp_ISL3
HTH_24
Arg_repressor
Sigma70_r4
DUF1670
HTH_32
Put_DNA-bind_N
PCI
Cullin
AlkZ-rel
z-alpha
Motif
Other DBs
NCBI-ProteinID:
AUT29413
LinkDB
All DBs
Position
complement(4238520..4239251)
Genome browser
AA seq
243 aa
AA seq
DB search
MKAARQQAIVDLLLNHTSLTTEALSEQLKVSKETIRRDLNELQTQGKILRNHGRAKYIHR
QNQDSGDPFHIRLKSHYAHKADIAREALAWIEEGMVIALDASSTCWYLARQLPDIDIQVF
TNSHPICHELGKRERIQLISSGGTLERKYGCYVNPALISQLKSLEIDLFIFSCEGIDSSG
ALWDSNAINADYKSMLLKRAAQSLLLIDKSKFNRSGEARIGHLDEVTHIISDERQVAASL
VTA
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcggcacgccagcaagcgatagtcgacctgctgctgaaccataccagcctgacc
acggaagctctctctgaacagctaaaggtcagtaaagaaaccattcgtcgcgatctcaat
gaattacagacgcagggtaaaattctgcgcaatcatgggcgcgctaaatatatccaccgt
caaaatcaagacagcggcgatccctttcatatccggctgaaaagccattatgcgcataaa
gcagatattgcccgcgaagcgctcgcgtggattgaagaagggatggtgatagccttagac
gccagttcaacttgctggtatctggcacgccagttgcctgacatcgacattcaggtcttc
accaatagccatccaatttgtcatgaactcggtaagcgcgaacgcattcaactgatcagt
tccggcggcacacttgagcgcaaatatggttgttacgtcaatcccgcgctgatttcccag
cttaaatcgctggaaatcgatctgtttattttttcttgcgaagggatcgacagcagcggc
gcactgtgggactccaatgcgatcaacgctgactacaaatcgatgctattaaaacgtgcc
gcgcaatcgttgttattgattgataaaagtaaatttaatcgttctggagaagcccgcatc
gggcatctggatgaggtcacgcacattatttctgatgagcgccaggttgcggcttctttg
gtgacagcctga
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integrated database retrieval system
