Escherichia marmotae: C1192_21910
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Entry
C1192_21910 CDS
T05353
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ema
Escherichia marmotae
Brite
KEGG Orthology (KO) [BR:
ema00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ema03016
]
C1192_21910
Enzymes [BR:
ema01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
C1192_21910
Transfer RNA biogenesis [BR:
ema03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
C1192_21910
Prokaryotic type
C1192_21910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AUT29465
LinkDB
All DBs
Position
4300039..4301088
Genome browser
AA seq
349 aa
AA seq
DB search
MIEFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEHILVRVLKNGCNTRFVAD
ALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSAFQLEGCQVLEYARHKRK
LRLGALKGNAFTLVLREVSNRDDVEQRLIDICVKGVPNYFGAQRFGIGGSNLQGALRWAQ
TNTPVRDRNKRSFWLSAARSALFNQIVAERLKKADVNQVVDGDALQLAGRGSWFVATNDE
MAKLQRRVNDKELMITAALPGSGEWGTQREALAFEQAAVADETELQALLVREKVDAARRA
MLLYPQQLSWNWWDDVTVEIRFWLPAGSFATSVVRELINTTGDYAHIAE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgattgagtttgataatctcacttacctccacggcaaaccgcaaggcaccgggctgctg
aaagccaacccggaagactttgtggtggtggaagatttaggctttgagcctgatggtgaa
ggtgagcatattctggtgcgggtgcttaaaaacggttgcaatacccggtttgtggcggac
gcactggcaaaattcctgaaaattcatgctcgtgaagtcagcttcgcggggcagaaagac
aaacatgccgttacggaacagtggttatgcgcgcgtgtaccgggcaaagaaatgcctgat
ctgagtgcgtttcaactggaaggttgccaggtgctggagtatgcgcggcacaagcgtaag
ctgcgtttaggggcgctgaaaggtaacgcctttaccctggtgctacgcgaagtgagcaat
cgcgatgacgttgaacagcgtctgatcgatatttgcgtgaaaggtgtaccgaactacttt
ggtgcgcaacgttttggtattggcggcagtaacttgcagggagcgctgcgctgggcgcaa
acgaatactccggtgcgcgatcgcaataaacgcagtttttggttgtcggcagcccgtagt
gcgttgtttaatcagattgttgctgagcgcctcaaaaaagcggacgttaatcaagttgtt
gacggcgatgcgctacaattagccgggcgtggtagctggtttgttgctactaacgatgaa
atggcgaaattacagcgtcgcgtcaacgataaagagctgatgattaccgctgctttgccc
ggtagcggcgagtggggaacccagcgtgaggcgctggcattcgaacaagcggcggttgcc
gacgaaactgaattgcaagcattactggtacgcgaaaaagtagacgccgcgcgcagagcg
atgctgttatatccacaacaattaagctggaactggtgggatgacgtcaccgtagaaatc
cgtttctggcttccggcgggaagttttgcaaccagcgttgtcagggaacttatcaacaca
acaggtgattatgcgcatattgctgagtaa
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