Escherichia marmotae: C1192_22630
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Entry
C1192_22630 CDS
T05353
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
ema
Escherichia marmotae
Brite
KEGG Orthology (KO) [BR:
ema00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ema03009
]
C1192_22630
Enzymes [BR:
ema01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
C1192_22630
Ribosome biogenesis [BR:
ema03009
]
Prokaryotic type
rRNA helicases
C1192_22630
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AUT29587
UniProt:
A0A2B7LG76
LinkDB
All DBs
Position
complement(4433708..4435042)
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AA seq
444 aa
AA seq
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MTVTTFSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLL
PALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAKHTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRW
RKQTLLFSATLEGDAIQDFAERLLEDPVEVSANPSTRERKKIHQWYYRADDLEHKTALLV
HLLKQPEATRSIVFVRKRERVHELANWLREAGINNCYLEGEMVQGKRNEAIKRLTEGRVN
VLVATDVAARGIDIPDVSHVFNFDMPRSGDTYLHRIGRTARAGRKGIAISLVEAHDHLLL
GKVSRYIEEPIKARVIDELRPKTRAPSEKQTGKPSKKVLAKRAEKKKAKEKEKPRVKKRH
RDTKNIGKRRKPSGTGVPPQTTEE
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaacgactttttccgaacttgaactcgacgaaagcctgctggaagccctccag
gataaaggtttcactcgcccgaccgccattcaggctgccgccattccgcctgcgctcgat
ggccgtgatgtactcggttctgcgccgacaggcaccggtaaaacggcggcgtatctgctg
ccagcgttgcagcacctgctcgatttcccgcgtaagaaatccggtccaccgcgtattttg
atcctcaccccaactcgcgaactggcgatgcaggtggccgatcatgcccgtgaactggcg
aaacatacacatctggatattgccaccatcaccggcggcgtggcctatatgaaccacgcg
gaagtgttcagcgaaaaccaggacatcgtggtcgccacgaccggacgtctgctgcaatac
ataaaagaagagaacttcgattgccgcgcggttgaaacactgatccttgacgaagcagac
cgtatgctggatatgggcttcgcccaagatatcgaacatattgctggcgaaactcgctgg
cgtaagcaaaccctgctcttctcagctacgttggaaggcgatgccattcaggattttgcc
gaacgtctgctggaggatccggtggaagtttctgctaatccatccacccgtgagcgcaaa
aagattcatcagtggtattaccgtgccgatgaccttgagcataaaactgcgttgctggta
catctgttaaaacagccggaagcgactcgctcaatcgtatttgtgcgcaagcgtgagcgt
gtgcatgaactggcaaactggttgcgcgaagcaggcatcaacaactgctatctcgaaggt
gagatggtacaaggcaagcgtaatgaagcgattaagcgtctgactgaaggtcgcgtaaac
gtgctggttgccaccgacgttgccgcacgtggtatcgacattccggatgtcagccacgtc
tttaacttcgatatgccgcgcagtggcgatacctatttgcaccgaatcgggcgtaccgct
cgcgccggtcgtaaagggatcgcgatttcactggttgaagcccatgaccatctgctgctg
ggcaaagttagtcgttatattgaagagccgattaaagctcgcgtcattgatgagttacgc
ccgaaaacgcgtgcgccaagcgagaaacagacgggtaaaccatcgaagaaagtcctggca
aaacgcgccgagaagaaaaaggctaaagagaaagagaagccacgggtgaaaaaacgccac
cgcgataccaaaaatattggtaagcgccgcaaaccaagcggaacaggcgtgccgccgcaa
acgacagaagagtaa
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